Gene : XTH24 A. thaliana TAIR10
Primary Identifier:  ? AT4G30270 Defline:  (1 of 9) PTHR31062//PTHR31062:SF20 - FAMILY NOT NAMED // XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 14-RELATED
Genomic Order:  3069 Name:  ? AT4G30270
Secondary Identifier:  ? PAC:19644236
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Expression

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4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G30270 0.5kb upstream 0.5kb upstream 1901 true Chr4: 14819192-14821092 Arabidopsis thaliana
AT4G30270 0.5kb upstream 0.5kb upstream 500 false Chr4: 14820593-14821092 Arabidopsis thaliana
AT4G30270 0.5kb downstream 0.5kb downstream 1901 true Chr4: 14818692-14820592 Arabidopsis thaliana
AT4G30270 0.5kb downstream 0.5kb downstream 500 false Chr4: 14818692-14819191 Arabidopsis thaliana
AT4G30270 1.0kb upstream 1.0kb upstream 2401 true Chr4: 14819192-14821592 Arabidopsis thaliana
AT4G30270 1.0kb upstream 1.0kb upstream 1000 false Chr4: 14820593-14821592 Arabidopsis thaliana
AT4G30270 1.0kb downstream 1.0kb downstream 2401 true Chr4: 14818192-14820592 Arabidopsis thaliana
AT4G30270 1.0kb downstream 1.0kb downstream 1000 false Chr4: 14818192-14819191 Arabidopsis thaliana
AT4G30270 2.0kb upstream 2.0kb upstream 3401 true Chr4: 14819192-14822592 Arabidopsis thaliana
AT4G30270 2.0kb upstream 2.0kb upstream 2000 false Chr4: 14820593-14822592 Arabidopsis thaliana
AT4G30270 2.0kb downstream 2.0kb downstream 3401 true Chr4: 14817192-14820592 Arabidopsis thaliana
AT4G30270 2.0kb downstream 2.0kb downstream 2000 false Chr4: 14817192-14819191 Arabidopsis thaliana
AT4G30270 5.0kb upstream 5.0kb upstream 6401 true Chr4: 14819192-14825592 Arabidopsis thaliana
AT4G30270 5.0kb upstream 5.0kb upstream 5000 false Chr4: 14820593-14825592 Arabidopsis thaliana
AT4G30270 5.0kb downstream 5.0kb downstream 6401 true Chr4: 14814192-14820592 Arabidopsis thaliana
AT4G30270 5.0kb downstream 5.0kb downstream 5000 false Chr4: 14814192-14819191 Arabidopsis thaliana
AT4G30270 10.0kb upstream 10.0kb upstream 11401 true Chr4: 14819192-14830592 Arabidopsis thaliana
AT4G30270 10.0kb upstream 10.0kb upstream 10000 false Chr4: 14820593-14830592 Arabidopsis thaliana
AT4G30270 10.0kb downstream 10.0kb downstream 11401 true Chr4: 14809192-14820592 Arabidopsis thaliana
AT4G30270 10.0kb downstream 10.0kb downstream 10000 false Chr4: 14809192-14819191 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377076 5261 Brassicaceae View MSA
123840793 5264 Brassicales-Malvales View MSA
124350443 5266 SBM View MSA
124251513 5268 Malvidae View MSA
124074397 5270 Rosid View MSA
123749278 5271 Pentapetalae View MSA
122796709 5272 Eudicot View MSA
122046395 5273 Angiosperm View MSA
121350333 5274 Embryophyte View MSA
123381682 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 131.939     High  
cufflinks 99.715     High  
cufflinks 277.589     High  
cufflinks 188.021     High  
cufflinks 560.623     High High
cufflinks 74.255     High Low

0 Strain