Gene : AT4G30240 A. thaliana TAIR10
Defline:  (1 of 4) PF09177 - Syntaxin 6, N-terminal (Syntaxin-6_N) Genomic Order:  3066
Name:  ? AT4G30240 Secondary Identifier:  ? PAC:19647876
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G30240 0.5kb upstream 0.5kb upstream 2567 true Chr4: 14807919-14810485 Arabidopsis thaliana
AT4G30240 0.5kb upstream 0.5kb upstream 500 false Chr4: 14809986-14810485 Arabidopsis thaliana
AT4G30240 0.5kb downstream 0.5kb downstream 2567 true Chr4: 14807419-14809985 Arabidopsis thaliana
AT4G30240 0.5kb downstream 0.5kb downstream 500 false Chr4: 14807419-14807918 Arabidopsis thaliana
AT4G30240 1.0kb upstream 1.0kb upstream 3067 true Chr4: 14807919-14810985 Arabidopsis thaliana
AT4G30240 1.0kb upstream 1.0kb upstream 1000 false Chr4: 14809986-14810985 Arabidopsis thaliana
AT4G30240 1.0kb downstream 1.0kb downstream 3067 true Chr4: 14806919-14809985 Arabidopsis thaliana
AT4G30240 1.0kb downstream 1.0kb downstream 1000 false Chr4: 14806919-14807918 Arabidopsis thaliana
AT4G30240 2.0kb upstream 2.0kb upstream 4067 true Chr4: 14807919-14811985 Arabidopsis thaliana
AT4G30240 2.0kb upstream 2.0kb upstream 2000 false Chr4: 14809986-14811985 Arabidopsis thaliana
AT4G30240 2.0kb downstream 2.0kb downstream 4067 true Chr4: 14805919-14809985 Arabidopsis thaliana
AT4G30240 2.0kb downstream 2.0kb downstream 2000 false Chr4: 14805919-14807918 Arabidopsis thaliana
AT4G30240 5.0kb upstream 5.0kb upstream 7067 true Chr4: 14807919-14814985 Arabidopsis thaliana
AT4G30240 5.0kb upstream 5.0kb upstream 5000 false Chr4: 14809986-14814985 Arabidopsis thaliana
AT4G30240 5.0kb downstream 5.0kb downstream 7067 true Chr4: 14802919-14809985 Arabidopsis thaliana
AT4G30240 5.0kb downstream 5.0kb downstream 5000 false Chr4: 14802919-14807918 Arabidopsis thaliana
AT4G30240 10.0kb upstream 10.0kb upstream 12067 true Chr4: 14807919-14819985 Arabidopsis thaliana
AT4G30240 10.0kb upstream 10.0kb upstream 10000 false Chr4: 14809986-14819985 Arabidopsis thaliana
AT4G30240 10.0kb downstream 10.0kb downstream 12067 true Chr4: 14797919-14809985 Arabidopsis thaliana
AT4G30240 10.0kb downstream 10.0kb downstream 10000 false Chr4: 14797919-14807918 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378080 5261 Brassicaceae View MSA
123840621 5264 Brassicales-Malvales View MSA
124346363 5266 SBM View MSA
124243646 5268 Malvidae View MSA
124050806 5270 Rosid View MSA
123751797 5271 Pentapetalae View MSA
122791749 5272 Eudicot View MSA
122042907 5273 Angiosperm View MSA
121348883 5274 Embryophyte View MSA
123381058 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.939        
cufflinks 26.717        
cufflinks 10.58        
cufflinks 23.266        
cufflinks 9.43       Low
cufflinks 26.761        

0 Strain