Gene : AT4G30100 A. thaliana TAIR10
Defline:  (1 of 2) PTHR10887//PTHR10887:SF359 - DNA2/NAM7 HELICASE FAMILY // HELICASE SEN1 Genomic Order:  3052
Name:  ? AT4G30100 Secondary Identifier:  ? PAC:19648291
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G30100 0.5kb upstream 0.5kb upstream 6371 true Chr4: 14713691-14720061 Arabidopsis thaliana
AT4G30100 0.5kb upstream 0.5kb upstream 500 false Chr4: 14713691-14714190 Arabidopsis thaliana
AT4G30100 0.5kb downstream 0.5kb downstream 6371 true Chr4: 14714191-14720561 Arabidopsis thaliana
AT4G30100 0.5kb downstream 0.5kb downstream 500 false Chr4: 14720062-14720561 Arabidopsis thaliana
AT4G30100 1.0kb upstream 1.0kb upstream 6871 true Chr4: 14713191-14720061 Arabidopsis thaliana
AT4G30100 1.0kb upstream 1.0kb upstream 1000 false Chr4: 14713191-14714190 Arabidopsis thaliana
AT4G30100 1.0kb downstream 1.0kb downstream 6871 true Chr4: 14714191-14721061 Arabidopsis thaliana
AT4G30100 1.0kb downstream 1.0kb downstream 1000 false Chr4: 14720062-14721061 Arabidopsis thaliana
AT4G30100 2.0kb upstream 2.0kb upstream 7871 true Chr4: 14712191-14720061 Arabidopsis thaliana
AT4G30100 2.0kb upstream 2.0kb upstream 2000 false Chr4: 14712191-14714190 Arabidopsis thaliana
AT4G30100 2.0kb downstream 2.0kb downstream 7871 true Chr4: 14714191-14722061 Arabidopsis thaliana
AT4G30100 2.0kb downstream 2.0kb downstream 2000 false Chr4: 14720062-14722061 Arabidopsis thaliana
AT4G30100 5.0kb upstream 5.0kb upstream 10871 true Chr4: 14709191-14720061 Arabidopsis thaliana
AT4G30100 5.0kb upstream 5.0kb upstream 5000 false Chr4: 14709191-14714190 Arabidopsis thaliana
AT4G30100 5.0kb downstream 5.0kb downstream 10871 true Chr4: 14714191-14725061 Arabidopsis thaliana
AT4G30100 5.0kb downstream 5.0kb downstream 5000 false Chr4: 14720062-14725061 Arabidopsis thaliana
AT4G30100 10.0kb upstream 10.0kb upstream 15871 true Chr4: 14704191-14720061 Arabidopsis thaliana
AT4G30100 10.0kb upstream 10.0kb upstream 10000 false Chr4: 14704191-14714190 Arabidopsis thaliana
AT4G30100 10.0kb downstream 10.0kb downstream 15871 true Chr4: 14714191-14730061 Arabidopsis thaliana
AT4G30100 10.0kb downstream 10.0kb downstream 10000 false Chr4: 14720062-14730061 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373645 5261 Brassicaceae View MSA
123831322 5264 Brassicales-Malvales View MSA
124344250 5266 SBM View MSA
124243025 5268 Malvidae View MSA
124061301 5270 Rosid View MSA
123751960 5271 Pentapetalae View MSA
122793579 5272 Eudicot View MSA
122046375 5273 Angiosperm View MSA
123429092 5275 Viridiplantae View MSA
121350941 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.439        
cufflinks 20.794        
cufflinks 13.056       Low
cufflinks 21.292        
cufflinks 13.028       Low
cufflinks 20.893        

0 Strain