Gene : AT4G32640 A. thaliana TAIR10

Defline:  (1 of 3) K14007 - protein transport protein SEC24 (SEC24) Genomic Order:  3328
Name:  ? AT4G32640 Secondary Identifier:  ? PAC:19648814

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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G32640 0.5kb upstream 0.5kb upstream 9362 true Chr4: 15741501-15750862 Arabidopsis thaliana
AT4G32640 0.5kb upstream 0.5kb upstream 500 false Chr4: 15741501-15742000 Arabidopsis thaliana
AT4G32640 0.5kb downstream 0.5kb downstream 9362 true Chr4: 15742001-15751362 Arabidopsis thaliana
AT4G32640 0.5kb downstream 0.5kb downstream 500 false Chr4: 15750863-15751362 Arabidopsis thaliana
AT4G32640 1.0kb upstream 1.0kb upstream 9862 true Chr4: 15741001-15750862 Arabidopsis thaliana
AT4G32640 1.0kb upstream 1.0kb upstream 1000 false Chr4: 15741001-15742000 Arabidopsis thaliana
AT4G32640 1.0kb downstream 1.0kb downstream 9862 true Chr4: 15742001-15751862 Arabidopsis thaliana
AT4G32640 1.0kb downstream 1.0kb downstream 1000 false Chr4: 15750863-15751862 Arabidopsis thaliana
AT4G32640 2.0kb upstream 2.0kb upstream 10862 true Chr4: 15740001-15750862 Arabidopsis thaliana
AT4G32640 2.0kb upstream 2.0kb upstream 2000 false Chr4: 15740001-15742000 Arabidopsis thaliana
AT4G32640 2.0kb downstream 2.0kb downstream 10862 true Chr4: 15742001-15752862 Arabidopsis thaliana
AT4G32640 2.0kb downstream 2.0kb downstream 2000 false Chr4: 15750863-15752862 Arabidopsis thaliana
AT4G32640 5.0kb upstream 5.0kb upstream 13862 true Chr4: 15737001-15750862 Arabidopsis thaliana
AT4G32640 5.0kb upstream 5.0kb upstream 5000 false Chr4: 15737001-15742000 Arabidopsis thaliana
AT4G32640 5.0kb downstream 5.0kb downstream 13862 true Chr4: 15742001-15755862 Arabidopsis thaliana
AT4G32640 5.0kb downstream 5.0kb downstream 5000 false Chr4: 15750863-15755862 Arabidopsis thaliana
AT4G32640 10.0kb upstream 10.0kb upstream 18862 true Chr4: 15732001-15750862 Arabidopsis thaliana
AT4G32640 10.0kb upstream 10.0kb upstream 10000 false Chr4: 15732001-15742000 Arabidopsis thaliana
AT4G32640 10.0kb downstream 10.0kb downstream 18862 true Chr4: 15742001-15760862 Arabidopsis thaliana
AT4G32640 10.0kb downstream 10.0kb downstream 10000 false Chr4: 15750863-15760862 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371528 5261 Brassicaceae View MSA
123834526 5264 Brassicales-Malvales View MSA
124351080 5266 SBM View MSA
124247961 5268 Malvidae View MSA
124069114 5270 Rosid View MSA
123737025 5271 Pentapetalae View MSA
122786743 5272 Eudicot View MSA
122044519 5273 Angiosperm View MSA
121345636 5274 Embryophyte View MSA
123424318 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.217        
cufflinks 5.607        
cufflinks 4.487       Low
cufflinks 5.797        
cufflinks 5.161        
cufflinks 6.29       High

0 Strain