Gene : AT4G32450 A. thaliana TAIR10
Defline:  (1 of 4) PF01535//PF14432 - PPR repeat (PPR) // DYW family of nucleic acid deaminases (DYW_deaminase) Genomic Order:  3308
Name:  ? AT4G32450 Secondary Identifier:  ? PAC:19646638
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G32450 0.5kb upstream 0.5kb upstream 2453 true Chr4: 15660427-15662879 Arabidopsis thaliana
AT4G32450 0.5kb upstream 0.5kb upstream 500 false Chr4: 15660427-15660926 Arabidopsis thaliana
AT4G32450 0.5kb downstream 0.5kb downstream 2453 true Chr4: 15660927-15663379 Arabidopsis thaliana
AT4G32450 0.5kb downstream 0.5kb downstream 500 false Chr4: 15662880-15663379 Arabidopsis thaliana
AT4G32450 1.0kb upstream 1.0kb upstream 2953 true Chr4: 15659927-15662879 Arabidopsis thaliana
AT4G32450 1.0kb upstream 1.0kb upstream 1000 false Chr4: 15659927-15660926 Arabidopsis thaliana
AT4G32450 1.0kb downstream 1.0kb downstream 2953 true Chr4: 15660927-15663879 Arabidopsis thaliana
AT4G32450 1.0kb downstream 1.0kb downstream 1000 false Chr4: 15662880-15663879 Arabidopsis thaliana
AT4G32450 2.0kb upstream 2.0kb upstream 3953 true Chr4: 15658927-15662879 Arabidopsis thaliana
AT4G32450 2.0kb upstream 2.0kb upstream 2000 false Chr4: 15658927-15660926 Arabidopsis thaliana
AT4G32450 2.0kb downstream 2.0kb downstream 3953 true Chr4: 15660927-15664879 Arabidopsis thaliana
AT4G32450 2.0kb downstream 2.0kb downstream 2000 false Chr4: 15662880-15664879 Arabidopsis thaliana
AT4G32450 5.0kb upstream 5.0kb upstream 6953 true Chr4: 15655927-15662879 Arabidopsis thaliana
AT4G32450 5.0kb upstream 5.0kb upstream 5000 false Chr4: 15655927-15660926 Arabidopsis thaliana
AT4G32450 5.0kb downstream 5.0kb downstream 6953 true Chr4: 15660927-15667879 Arabidopsis thaliana
AT4G32450 5.0kb downstream 5.0kb downstream 5000 false Chr4: 15662880-15667879 Arabidopsis thaliana
AT4G32450 10.0kb upstream 10.0kb upstream 11953 true Chr4: 15650927-15662879 Arabidopsis thaliana
AT4G32450 10.0kb upstream 10.0kb upstream 10000 false Chr4: 15650927-15660926 Arabidopsis thaliana
AT4G32450 10.0kb downstream 10.0kb downstream 11953 true Chr4: 15660927-15672879 Arabidopsis thaliana
AT4G32450 10.0kb downstream 10.0kb downstream 10000 false Chr4: 15662880-15672879 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361562 5261 Brassicaceae View MSA
123838916 5264 Brassicales-Malvales View MSA
124348539 5266 SBM View MSA
124243904 5268 Malvidae View MSA
124066388 5270 Rosid View MSA
123750280 5271 Pentapetalae View MSA
122796437 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.875        
cufflinks 5.868        
cufflinks 3.125        
cufflinks 6.868       High
cufflinks 2.9        
cufflinks 5.193        

0 Strain