Gene : AT4G32480 A. thaliana TAIR10
Defline:  (1 of 2) PTHR31579:SF11 - EXPRESSED PROTEIN Genomic Order:  3311
Name:  ? AT4G32480 Secondary Identifier:  ? PAC:19647146
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G32480 0.5kb upstream 0.5kb upstream 2070 true Chr4: 15675904-15677973 Arabidopsis thaliana
AT4G32480 0.5kb upstream 0.5kb upstream 500 false Chr4: 15675904-15676403 Arabidopsis thaliana
AT4G32480 0.5kb downstream 0.5kb downstream 2070 true Chr4: 15676404-15678473 Arabidopsis thaliana
AT4G32480 0.5kb downstream 0.5kb downstream 500 false Chr4: 15677974-15678473 Arabidopsis thaliana
AT4G32480 1.0kb upstream 1.0kb upstream 2570 true Chr4: 15675404-15677973 Arabidopsis thaliana
AT4G32480 1.0kb upstream 1.0kb upstream 1000 false Chr4: 15675404-15676403 Arabidopsis thaliana
AT4G32480 1.0kb downstream 1.0kb downstream 2570 true Chr4: 15676404-15678973 Arabidopsis thaliana
AT4G32480 1.0kb downstream 1.0kb downstream 1000 false Chr4: 15677974-15678973 Arabidopsis thaliana
AT4G32480 2.0kb upstream 2.0kb upstream 3570 true Chr4: 15674404-15677973 Arabidopsis thaliana
AT4G32480 2.0kb upstream 2.0kb upstream 2000 false Chr4: 15674404-15676403 Arabidopsis thaliana
AT4G32480 2.0kb downstream 2.0kb downstream 3570 true Chr4: 15676404-15679973 Arabidopsis thaliana
AT4G32480 2.0kb downstream 2.0kb downstream 2000 false Chr4: 15677974-15679973 Arabidopsis thaliana
AT4G32480 5.0kb upstream 5.0kb upstream 6570 true Chr4: 15671404-15677973 Arabidopsis thaliana
AT4G32480 5.0kb upstream 5.0kb upstream 5000 false Chr4: 15671404-15676403 Arabidopsis thaliana
AT4G32480 5.0kb downstream 5.0kb downstream 6570 true Chr4: 15676404-15682973 Arabidopsis thaliana
AT4G32480 5.0kb downstream 5.0kb downstream 5000 false Chr4: 15677974-15682973 Arabidopsis thaliana
AT4G32480 10.0kb upstream 10.0kb upstream 11570 true Chr4: 15666404-15677973 Arabidopsis thaliana
AT4G32480 10.0kb upstream 10.0kb upstream 10000 false Chr4: 15666404-15676403 Arabidopsis thaliana
AT4G32480 10.0kb downstream 10.0kb downstream 11570 true Chr4: 15676404-15687973 Arabidopsis thaliana
AT4G32480 10.0kb downstream 10.0kb downstream 10000 false Chr4: 15677974-15687973 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373576 5261 Brassicaceae View MSA
123836127 5264 Brassicales-Malvales View MSA
124340947 5266 SBM View MSA
124246421 5268 Malvidae View MSA
124071276 5270 Rosid View MSA
123751272 5271 Pentapetalae View MSA
122785688 5272 Eudicot View MSA
122045708 5273 Angiosperm View MSA
123429021 5275 Viridiplantae View MSA
121310489 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.198       Low
cufflinks 40.022     High  
cufflinks 122.12     High High
cufflinks 58.32     High  
cufflinks 113.368     High High
cufflinks 25.504        

0 Strain