Gene : AT4G32175 A. thaliana TAIR10
Defline:  (1 of 2) K03681 - exosome complex component RRP40 (RRP40, EXOSC3) Genomic Order:  3275
Name:  ? AT4G32175 Secondary Identifier:  ? PAC:19643730
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G32175 0.5kb upstream 0.5kb upstream 2630 true Chr4: 15534973-15537602 Arabidopsis thaliana
AT4G32175 0.5kb upstream 0.5kb upstream 500 false Chr4: 15534973-15535472 Arabidopsis thaliana
AT4G32175 0.5kb downstream 0.5kb downstream 2630 true Chr4: 15535473-15538102 Arabidopsis thaliana
AT4G32175 0.5kb downstream 0.5kb downstream 500 false Chr4: 15537603-15538102 Arabidopsis thaliana
AT4G32175 1.0kb upstream 1.0kb upstream 3130 true Chr4: 15534473-15537602 Arabidopsis thaliana
AT4G32175 1.0kb upstream 1.0kb upstream 1000 false Chr4: 15534473-15535472 Arabidopsis thaliana
AT4G32175 1.0kb downstream 1.0kb downstream 3130 true Chr4: 15535473-15538602 Arabidopsis thaliana
AT4G32175 1.0kb downstream 1.0kb downstream 1000 false Chr4: 15537603-15538602 Arabidopsis thaliana
AT4G32175 2.0kb upstream 2.0kb upstream 4130 true Chr4: 15533473-15537602 Arabidopsis thaliana
AT4G32175 2.0kb upstream 2.0kb upstream 2000 false Chr4: 15533473-15535472 Arabidopsis thaliana
AT4G32175 2.0kb downstream 2.0kb downstream 4130 true Chr4: 15535473-15539602 Arabidopsis thaliana
AT4G32175 2.0kb downstream 2.0kb downstream 2000 false Chr4: 15537603-15539602 Arabidopsis thaliana
AT4G32175 5.0kb upstream 5.0kb upstream 7130 true Chr4: 15530473-15537602 Arabidopsis thaliana
AT4G32175 5.0kb upstream 5.0kb upstream 5000 false Chr4: 15530473-15535472 Arabidopsis thaliana
AT4G32175 5.0kb downstream 5.0kb downstream 7130 true Chr4: 15535473-15542602 Arabidopsis thaliana
AT4G32175 5.0kb downstream 5.0kb downstream 5000 false Chr4: 15537603-15542602 Arabidopsis thaliana
AT4G32175 10.0kb upstream 10.0kb upstream 12130 true Chr4: 15525473-15537602 Arabidopsis thaliana
AT4G32175 10.0kb upstream 10.0kb upstream 10000 false Chr4: 15525473-15535472 Arabidopsis thaliana
AT4G32175 10.0kb downstream 10.0kb downstream 12130 true Chr4: 15535473-15547602 Arabidopsis thaliana
AT4G32175 10.0kb downstream 10.0kb downstream 10000 false Chr4: 15537603-15547602 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380921 5261 Brassicaceae View MSA
123829333 5264 Brassicales-Malvales View MSA
124338921 5266 SBM View MSA
124252694 5268 Malvidae View MSA
124061201 5270 Rosid View MSA
123736741 5271 Pentapetalae View MSA
122789639 5272 Eudicot View MSA
122045630 5273 Angiosperm View MSA
121344862 5274 Embryophyte View MSA
123428759 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.347        
cufflinks 3.975       High
cufflinks 2.94        
cufflinks 3.678        
cufflinks 2.773       Low
cufflinks 3.946        

0 Strain