Gene : ASY2 A. thaliana TAIR10
Primary Identifier:  ? AT4G32200 Defline:  (1 of 2) KOG4652 - HORMA domain
Genomic Order:  3278 Name:  ? AT4G32200
Secondary Identifier:  ? PAC:19647639
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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G32200 0.5kb upstream 0.5kb upstream 6755 true Chr4: 15548340-15555094 Arabidopsis thaliana
AT4G32200 0.5kb upstream 0.5kb upstream 500 false Chr4: 15548340-15548839 Arabidopsis thaliana
AT4G32200 0.5kb downstream 0.5kb downstream 6755 true Chr4: 15548840-15555594 Arabidopsis thaliana
AT4G32200 0.5kb downstream 0.5kb downstream 500 false Chr4: 15555095-15555594 Arabidopsis thaliana
AT4G32200 1.0kb upstream 1.0kb upstream 7255 true Chr4: 15547840-15555094 Arabidopsis thaliana
AT4G32200 1.0kb upstream 1.0kb upstream 1000 false Chr4: 15547840-15548839 Arabidopsis thaliana
AT4G32200 1.0kb downstream 1.0kb downstream 7255 true Chr4: 15548840-15556094 Arabidopsis thaliana
AT4G32200 1.0kb downstream 1.0kb downstream 1000 false Chr4: 15555095-15556094 Arabidopsis thaliana
AT4G32200 2.0kb upstream 2.0kb upstream 8255 true Chr4: 15546840-15555094 Arabidopsis thaliana
AT4G32200 2.0kb upstream 2.0kb upstream 2000 false Chr4: 15546840-15548839 Arabidopsis thaliana
AT4G32200 2.0kb downstream 2.0kb downstream 8255 true Chr4: 15548840-15557094 Arabidopsis thaliana
AT4G32200 2.0kb downstream 2.0kb downstream 2000 false Chr4: 15555095-15557094 Arabidopsis thaliana
AT4G32200 5.0kb upstream 5.0kb upstream 11255 true Chr4: 15543840-15555094 Arabidopsis thaliana
AT4G32200 5.0kb upstream 5.0kb upstream 5000 false Chr4: 15543840-15548839 Arabidopsis thaliana
AT4G32200 5.0kb downstream 5.0kb downstream 11255 true Chr4: 15548840-15560094 Arabidopsis thaliana
AT4G32200 5.0kb downstream 5.0kb downstream 5000 false Chr4: 15555095-15560094 Arabidopsis thaliana
AT4G32200 10.0kb upstream 10.0kb upstream 16255 true Chr4: 15538840-15555094 Arabidopsis thaliana
AT4G32200 10.0kb upstream 10.0kb upstream 10000 false Chr4: 15538840-15548839 Arabidopsis thaliana
AT4G32200 10.0kb downstream 10.0kb downstream 16255 true Chr4: 15548840-15565094 Arabidopsis thaliana
AT4G32200 10.0kb downstream 10.0kb downstream 10000 false Chr4: 15555095-15565094 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121494876 5273 Angiosperm Singleton cluster - no MSA
122330707 5261 Brassicaceae Singleton cluster - no MSA
123771933 5264 Brassicales-Malvales Singleton cluster - no MSA
124270456 5266 SBM Singleton cluster - no MSA
124126525 5268 Malvidae Singleton cluster - no MSA
123855431 5270 Rosid Singleton cluster - no MSA
123441411 5271 Pentapetalae Singleton cluster - no MSA
122476996 5272 Eudicot Singleton cluster - no MSA
120768243 5274 Embryophyte Singleton cluster - no MSA
122810632 5275 Viridiplantae Singleton cluster - no MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.961        
cufflinks 2.171        
cufflinks 0.629       Low
cufflinks 1.563        
cufflinks 0.748        
cufflinks 2.551       High

0 Strain