Gene : TAFII15 A. thaliana TAIR10
Primary Identifier:  ? AT4G31720 Defline:  (1 of 1) K03134 - transcription initiation factor TFIID subunit 10 (TAF10)
Genomic Order:  3225 Name:  ? AT4G31720
Secondary Identifier:  ? PAC:19646080
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0 Pathways

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G31720 0.5kb upstream 0.5kb upstream 2901 true Chr4: 15353952-15356852 Arabidopsis thaliana
AT4G31720 0.5kb upstream 0.5kb upstream 500 false Chr4: 15356353-15356852 Arabidopsis thaliana
AT4G31720 0.5kb downstream 0.5kb downstream 2901 true Chr4: 15353452-15356352 Arabidopsis thaliana
AT4G31720 0.5kb downstream 0.5kb downstream 500 false Chr4: 15353452-15353951 Arabidopsis thaliana
AT4G31720 1.0kb upstream 1.0kb upstream 3401 true Chr4: 15353952-15357352 Arabidopsis thaliana
AT4G31720 1.0kb upstream 1.0kb upstream 1000 false Chr4: 15356353-15357352 Arabidopsis thaliana
AT4G31720 1.0kb downstream 1.0kb downstream 3401 true Chr4: 15352952-15356352 Arabidopsis thaliana
AT4G31720 1.0kb downstream 1.0kb downstream 1000 false Chr4: 15352952-15353951 Arabidopsis thaliana
AT4G31720 2.0kb upstream 2.0kb upstream 4401 true Chr4: 15353952-15358352 Arabidopsis thaliana
AT4G31720 2.0kb upstream 2.0kb upstream 2000 false Chr4: 15356353-15358352 Arabidopsis thaliana
AT4G31720 2.0kb downstream 2.0kb downstream 4401 true Chr4: 15351952-15356352 Arabidopsis thaliana
AT4G31720 2.0kb downstream 2.0kb downstream 2000 false Chr4: 15351952-15353951 Arabidopsis thaliana
AT4G31720 5.0kb upstream 5.0kb upstream 7401 true Chr4: 15353952-15361352 Arabidopsis thaliana
AT4G31720 5.0kb upstream 5.0kb upstream 5000 false Chr4: 15356353-15361352 Arabidopsis thaliana
AT4G31720 5.0kb downstream 5.0kb downstream 7401 true Chr4: 15348952-15356352 Arabidopsis thaliana
AT4G31720 5.0kb downstream 5.0kb downstream 5000 false Chr4: 15348952-15353951 Arabidopsis thaliana
AT4G31720 10.0kb upstream 10.0kb upstream 12401 true Chr4: 15353952-15366352 Arabidopsis thaliana
AT4G31720 10.0kb upstream 10.0kb upstream 10000 false Chr4: 15356353-15366352 Arabidopsis thaliana
AT4G31720 10.0kb downstream 10.0kb downstream 12401 true Chr4: 15343952-15356352 Arabidopsis thaliana
AT4G31720 10.0kb downstream 10.0kb downstream 10000 false Chr4: 15343952-15353951 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381088 5261 Brassicaceae View MSA
123829858 5264 Brassicales-Malvales View MSA
124341655 5266 SBM View MSA
124239078 5268 Malvidae View MSA
124061135 5270 Rosid View MSA
123740018 5271 Pentapetalae View MSA
122796575 5272 Eudicot View MSA
122043600 5273 Angiosperm View MSA
121344919 5274 Embryophyte View MSA
123424848 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.663       Low
cufflinks 6.615        
cufflinks 5.039        
cufflinks 6.346        
cufflinks 5.604        
cufflinks 6.533        

0 Strain