Gene : EDA9 A. thaliana TAIR10
Primary Identifier:  ? AT4G34200 Defline:  (1 of 3) 1.1.1.95 - Phosphoglycerate dehydrogenase / Phosphoglyceric acid dehydrogenase
Genomic Order:  3498 Name:  ? AT4G34200
Secondary Identifier:  ? PAC:19644055
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana SER-GLYSYN-PWY Arabidopsis thaliana pathologic  
Athaliana SERSYN-PWY Arabidopsis thaliana pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G34200 0.5kb upstream 0.5kb upstream 3304 true Chr4: 16373819-16377122 Arabidopsis thaliana
AT4G34200 0.5kb upstream 0.5kb upstream 500 false Chr4: 16376623-16377122 Arabidopsis thaliana
AT4G34200 0.5kb downstream 0.5kb downstream 3304 true Chr4: 16373319-16376622 Arabidopsis thaliana
AT4G34200 0.5kb downstream 0.5kb downstream 500 false Chr4: 16373319-16373818 Arabidopsis thaliana
AT4G34200 1.0kb upstream 1.0kb upstream 3804 true Chr4: 16373819-16377622 Arabidopsis thaliana
AT4G34200 1.0kb upstream 1.0kb upstream 1000 false Chr4: 16376623-16377622 Arabidopsis thaliana
AT4G34200 1.0kb downstream 1.0kb downstream 3804 true Chr4: 16372819-16376622 Arabidopsis thaliana
AT4G34200 1.0kb downstream 1.0kb downstream 1000 false Chr4: 16372819-16373818 Arabidopsis thaliana
AT4G34200 2.0kb upstream 2.0kb upstream 4804 true Chr4: 16373819-16378622 Arabidopsis thaliana
AT4G34200 2.0kb upstream 2.0kb upstream 2000 false Chr4: 16376623-16378622 Arabidopsis thaliana
AT4G34200 2.0kb downstream 2.0kb downstream 4804 true Chr4: 16371819-16376622 Arabidopsis thaliana
AT4G34200 2.0kb downstream 2.0kb downstream 2000 false Chr4: 16371819-16373818 Arabidopsis thaliana
AT4G34200 5.0kb upstream 5.0kb upstream 7804 true Chr4: 16373819-16381622 Arabidopsis thaliana
AT4G34200 5.0kb upstream 5.0kb upstream 5000 false Chr4: 16376623-16381622 Arabidopsis thaliana
AT4G34200 5.0kb downstream 5.0kb downstream 7804 true Chr4: 16368819-16376622 Arabidopsis thaliana
AT4G34200 5.0kb downstream 5.0kb downstream 5000 false Chr4: 16368819-16373818 Arabidopsis thaliana
AT4G34200 10.0kb upstream 10.0kb upstream 12804 true Chr4: 16373819-16386622 Arabidopsis thaliana
AT4G34200 10.0kb upstream 10.0kb upstream 10000 false Chr4: 16376623-16386622 Arabidopsis thaliana
AT4G34200 10.0kb downstream 10.0kb downstream 12804 true Chr4: 16363819-16376622 Arabidopsis thaliana
AT4G34200 10.0kb downstream 10.0kb downstream 10000 false Chr4: 16363819-16373818 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377940 5261 Brassicaceae View MSA
123828170 5264 Brassicales-Malvales View MSA
124344584 5266 SBM View MSA
124245424 5268 Malvidae View MSA
124071894 5270 Rosid View MSA
123750282 5271 Pentapetalae View MSA
122795023 5272 Eudicot View MSA
122044765 5273 Angiosperm View MSA
121347094 5274 Embryophyte View MSA
123427510 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 41.757     High Low
cufflinks 95.297     High  
cufflinks 41.862     High Low
cufflinks 106.698     High  
cufflinks 51.266     High  
cufflinks 106.836     High  

0 Strain