Gene : MCCB A. thaliana TAIR10
Primary Identifier:  ? AT4G34030 Defline:  (1 of 1) K01969 - 3-methylcrotonyl-CoA carboxylase beta subunit (E6.4.1.4B)
Genomic Order:  3479 Name:  ? AT4G34030
Secondary Identifier:  ? PAC:19644638
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana LEU-DEG2-PWY Arabidopsis thaliana pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G34030 0.5kb upstream 0.5kb upstream 3421 true Chr4: 16300679-16304099 Arabidopsis thaliana
AT4G34030 0.5kb upstream 0.5kb upstream 500 false Chr4: 16300679-16301178 Arabidopsis thaliana
AT4G34030 0.5kb downstream 0.5kb downstream 3421 true Chr4: 16301179-16304599 Arabidopsis thaliana
AT4G34030 0.5kb downstream 0.5kb downstream 500 false Chr4: 16304100-16304599 Arabidopsis thaliana
AT4G34030 1.0kb upstream 1.0kb upstream 3921 true Chr4: 16300179-16304099 Arabidopsis thaliana
AT4G34030 1.0kb upstream 1.0kb upstream 1000 false Chr4: 16300179-16301178 Arabidopsis thaliana
AT4G34030 1.0kb downstream 1.0kb downstream 3921 true Chr4: 16301179-16305099 Arabidopsis thaliana
AT4G34030 1.0kb downstream 1.0kb downstream 1000 false Chr4: 16304100-16305099 Arabidopsis thaliana
AT4G34030 2.0kb upstream 2.0kb upstream 4921 true Chr4: 16299179-16304099 Arabidopsis thaliana
AT4G34030 2.0kb upstream 2.0kb upstream 2000 false Chr4: 16299179-16301178 Arabidopsis thaliana
AT4G34030 2.0kb downstream 2.0kb downstream 4921 true Chr4: 16301179-16306099 Arabidopsis thaliana
AT4G34030 2.0kb downstream 2.0kb downstream 2000 false Chr4: 16304100-16306099 Arabidopsis thaliana
AT4G34030 5.0kb upstream 5.0kb upstream 7921 true Chr4: 16296179-16304099 Arabidopsis thaliana
AT4G34030 5.0kb upstream 5.0kb upstream 5000 false Chr4: 16296179-16301178 Arabidopsis thaliana
AT4G34030 5.0kb downstream 5.0kb downstream 7921 true Chr4: 16301179-16309099 Arabidopsis thaliana
AT4G34030 5.0kb downstream 5.0kb downstream 5000 false Chr4: 16304100-16309099 Arabidopsis thaliana
AT4G34030 10.0kb upstream 10.0kb upstream 12921 true Chr4: 16291179-16304099 Arabidopsis thaliana
AT4G34030 10.0kb upstream 10.0kb upstream 10000 false Chr4: 16291179-16301178 Arabidopsis thaliana
AT4G34030 10.0kb downstream 10.0kb downstream 12921 true Chr4: 16301179-16314099 Arabidopsis thaliana
AT4G34030 10.0kb downstream 10.0kb downstream 10000 false Chr4: 16304100-16314099 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373218 5261 Brassicaceae View MSA
123839452 5264 Brassicales-Malvales View MSA
124340930 5266 SBM View MSA
124238998 5268 Malvidae View MSA
124061199 5270 Rosid View MSA
123740620 5271 Pentapetalae View MSA
122793626 5272 Eudicot View MSA
122044864 5273 Angiosperm View MSA
121344064 5274 Embryophyte View MSA
123424408 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.065        
cufflinks 18.031        
cufflinks 37.649     High High
cufflinks 21.727        
cufflinks 42.598     High High
cufflinks 14.615       Low

0 Strain