Gene : AT4G33840 A. thaliana TAIR10
Defline:  (1 of 3) PTHR31490//PTHR31490:SF2 - FAMILY NOT NAMED // GLYCOSYL HYDROLASE FAMILY 10 PROTEIN Genomic Order:  3457
Name:  ? AT4G33840 Secondary Identifier:  ? PAC:19645704
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G33840 0.5kb upstream 0.5kb upstream 3153 true Chr4: 16223501-16226653 Arabidopsis thaliana
AT4G33840 0.5kb upstream 0.5kb upstream 500 false Chr4: 16226154-16226653 Arabidopsis thaliana
AT4G33840 0.5kb downstream 0.5kb downstream 3153 true Chr4: 16223001-16226153 Arabidopsis thaliana
AT4G33840 0.5kb downstream 0.5kb downstream 500 false Chr4: 16223001-16223500 Arabidopsis thaliana
AT4G33840 1.0kb upstream 1.0kb upstream 3653 true Chr4: 16223501-16227153 Arabidopsis thaliana
AT4G33840 1.0kb upstream 1.0kb upstream 1000 false Chr4: 16226154-16227153 Arabidopsis thaliana
AT4G33840 1.0kb downstream 1.0kb downstream 3653 true Chr4: 16222501-16226153 Arabidopsis thaliana
AT4G33840 1.0kb downstream 1.0kb downstream 1000 false Chr4: 16222501-16223500 Arabidopsis thaliana
AT4G33840 2.0kb upstream 2.0kb upstream 4653 true Chr4: 16223501-16228153 Arabidopsis thaliana
AT4G33840 2.0kb upstream 2.0kb upstream 2000 false Chr4: 16226154-16228153 Arabidopsis thaliana
AT4G33840 2.0kb downstream 2.0kb downstream 4653 true Chr4: 16221501-16226153 Arabidopsis thaliana
AT4G33840 2.0kb downstream 2.0kb downstream 2000 false Chr4: 16221501-16223500 Arabidopsis thaliana
AT4G33840 5.0kb upstream 5.0kb upstream 7653 true Chr4: 16223501-16231153 Arabidopsis thaliana
AT4G33840 5.0kb upstream 5.0kb upstream 5000 false Chr4: 16226154-16231153 Arabidopsis thaliana
AT4G33840 5.0kb downstream 5.0kb downstream 7653 true Chr4: 16218501-16226153 Arabidopsis thaliana
AT4G33840 5.0kb downstream 5.0kb downstream 5000 false Chr4: 16218501-16223500 Arabidopsis thaliana
AT4G33840 10.0kb upstream 10.0kb upstream 12653 true Chr4: 16223501-16236153 Arabidopsis thaliana
AT4G33840 10.0kb upstream 10.0kb upstream 10000 false Chr4: 16226154-16236153 Arabidopsis thaliana
AT4G33840 10.0kb downstream 10.0kb downstream 12653 true Chr4: 16213501-16226153 Arabidopsis thaliana
AT4G33840 10.0kb downstream 10.0kb downstream 10000 false Chr4: 16213501-16223500 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376120 5261 Brassicaceae View MSA
123829097 5264 Brassicales-Malvales View MSA
124342056 5266 SBM View MSA
124248079 5268 Malvidae View MSA
124074050 5270 Rosid View MSA
123751912 5271 Pentapetalae View MSA
122790761 5272 Eudicot View MSA
122050145 5273 Angiosperm View MSA
121311762 5274 Embryophyte View MSA
123426707 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.011     Low High
cufflinks 0.006     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low  

0 Strain