Gene : RSL2 A. thaliana TAIR10
Primary Identifier:  ? AT4G33880 Defline:  (1 of 4) PTHR16223//PTHR16223:SF9 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR BHLH139-RELATED
Genomic Order:  3461 Name:  ? AT4G33880
Secondary Identifier:  ? PAC:19645236
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G33880 0.5kb upstream 0.5kb upstream 2275 true Chr4: 16239363-16241637 Arabidopsis thaliana
AT4G33880 0.5kb upstream 0.5kb upstream 500 false Chr4: 16241138-16241637 Arabidopsis thaliana
AT4G33880 0.5kb downstream 0.5kb downstream 2275 true Chr4: 16238863-16241137 Arabidopsis thaliana
AT4G33880 0.5kb downstream 0.5kb downstream 500 false Chr4: 16238863-16239362 Arabidopsis thaliana
AT4G33880 1.0kb upstream 1.0kb upstream 2775 true Chr4: 16239363-16242137 Arabidopsis thaliana
AT4G33880 1.0kb upstream 1.0kb upstream 1000 false Chr4: 16241138-16242137 Arabidopsis thaliana
AT4G33880 1.0kb downstream 1.0kb downstream 2775 true Chr4: 16238363-16241137 Arabidopsis thaliana
AT4G33880 1.0kb downstream 1.0kb downstream 1000 false Chr4: 16238363-16239362 Arabidopsis thaliana
AT4G33880 2.0kb upstream 2.0kb upstream 3775 true Chr4: 16239363-16243137 Arabidopsis thaliana
AT4G33880 2.0kb upstream 2.0kb upstream 2000 false Chr4: 16241138-16243137 Arabidopsis thaliana
AT4G33880 2.0kb downstream 2.0kb downstream 3775 true Chr4: 16237363-16241137 Arabidopsis thaliana
AT4G33880 2.0kb downstream 2.0kb downstream 2000 false Chr4: 16237363-16239362 Arabidopsis thaliana
AT4G33880 5.0kb upstream 5.0kb upstream 6775 true Chr4: 16239363-16246137 Arabidopsis thaliana
AT4G33880 5.0kb upstream 5.0kb upstream 5000 false Chr4: 16241138-16246137 Arabidopsis thaliana
AT4G33880 5.0kb downstream 5.0kb downstream 6775 true Chr4: 16234363-16241137 Arabidopsis thaliana
AT4G33880 5.0kb downstream 5.0kb downstream 5000 false Chr4: 16234363-16239362 Arabidopsis thaliana
AT4G33880 10.0kb upstream 10.0kb upstream 11775 true Chr4: 16239363-16251137 Arabidopsis thaliana
AT4G33880 10.0kb upstream 10.0kb upstream 10000 false Chr4: 16241138-16251137 Arabidopsis thaliana
AT4G33880 10.0kb downstream 10.0kb downstream 11775 true Chr4: 16229363-16241137 Arabidopsis thaliana
AT4G33880 10.0kb downstream 10.0kb downstream 10000 false Chr4: 16229363-16239362 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366054 5261 Brassicaceae View MSA
123837086 5264 Brassicales-Malvales View MSA
124344632 5266 SBM View MSA
124254066 5268 Malvidae View MSA
124070133 5270 Rosid View MSA
123748032 5271 Pentapetalae View MSA
122792151 5272 Eudicot View MSA
122043833 5273 Angiosperm View MSA
121310197 5274 Embryophyte View MSA
123347755 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.083     Low  
cufflinks 0.532        
cufflinks 0.038     Low  
cufflinks 0.575        
cufflinks 0.018     Low Low
cufflinks 1.203       High

0 Strain