Gene : AT4G33660 A. thaliana TAIR10
Defline:  (1 of 12) PF12734 - Cysteine-rich TM module stress tolerance (CYSTM) Genomic Order:  3439
Name:  ? AT4G33660 Secondary Identifier:  ? PAC:19645804
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G33660 0.5kb upstream 0.5kb upstream 1166 true Chr4: 16167286-16168451 Arabidopsis thaliana
AT4G33660 0.5kb upstream 0.5kb upstream 500 false Chr4: 16167952-16168451 Arabidopsis thaliana
AT4G33660 0.5kb downstream 0.5kb downstream 1166 true Chr4: 16166786-16167951 Arabidopsis thaliana
AT4G33660 0.5kb downstream 0.5kb downstream 500 false Chr4: 16166786-16167285 Arabidopsis thaliana
AT4G33660 1.0kb upstream 1.0kb upstream 1666 true Chr4: 16167286-16168951 Arabidopsis thaliana
AT4G33660 1.0kb upstream 1.0kb upstream 1000 false Chr4: 16167952-16168951 Arabidopsis thaliana
AT4G33660 1.0kb downstream 1.0kb downstream 1666 true Chr4: 16166286-16167951 Arabidopsis thaliana
AT4G33660 1.0kb downstream 1.0kb downstream 1000 false Chr4: 16166286-16167285 Arabidopsis thaliana
AT4G33660 2.0kb upstream 2.0kb upstream 2666 true Chr4: 16167286-16169951 Arabidopsis thaliana
AT4G33660 2.0kb upstream 2.0kb upstream 2000 false Chr4: 16167952-16169951 Arabidopsis thaliana
AT4G33660 2.0kb downstream 2.0kb downstream 2666 true Chr4: 16165286-16167951 Arabidopsis thaliana
AT4G33660 2.0kb downstream 2.0kb downstream 2000 false Chr4: 16165286-16167285 Arabidopsis thaliana
AT4G33660 5.0kb upstream 5.0kb upstream 5666 true Chr4: 16167286-16172951 Arabidopsis thaliana
AT4G33660 5.0kb upstream 5.0kb upstream 5000 false Chr4: 16167952-16172951 Arabidopsis thaliana
AT4G33660 5.0kb downstream 5.0kb downstream 5666 true Chr4: 16162286-16167951 Arabidopsis thaliana
AT4G33660 5.0kb downstream 5.0kb downstream 5000 false Chr4: 16162286-16167285 Arabidopsis thaliana
AT4G33660 10.0kb upstream 10.0kb upstream 10666 true Chr4: 16167286-16177951 Arabidopsis thaliana
AT4G33660 10.0kb upstream 10.0kb upstream 10000 false Chr4: 16167952-16177951 Arabidopsis thaliana
AT4G33660 10.0kb downstream 10.0kb downstream 10666 true Chr4: 16157286-16167951 Arabidopsis thaliana
AT4G33660 10.0kb downstream 10.0kb downstream 10000 false Chr4: 16157286-16167285 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026920 5273 Angiosperm View MSA
122370249 5261 Brassicaceae View MSA
123840818 5264 Brassicales-Malvales View MSA
124348029 5266 SBM View MSA
124245767 5268 Malvidae View MSA
124069872 5270 Rosid View MSA
123744649 5271 Pentapetalae View MSA
122794979 5272 Eudicot View MSA
121348545 5274 Embryophyte View MSA
123380908 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.801        
cufflinks 0.931        
cufflinks 18.089       High
cufflinks 1.475        
cufflinks 15.438        
cufflinks 0.828       Low

0 Strain