Gene : AT4G33700 A. thaliana TAIR10
Defline:  (1 of 2) PTHR12064//PTHR12064:SF30 - ANCIENT CONSERVED DOMAIN PROTEIN-RELATED // SUBFAMILY NOT NAMED Genomic Order:  3444
Name:  ? AT4G33700 Secondary Identifier:  ? PAC:19647857
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G33700 0.5kb upstream 0.5kb upstream 3706 true Chr4: 16176276-16179981 Arabidopsis thaliana
AT4G33700 0.5kb upstream 0.5kb upstream 500 false Chr4: 16179482-16179981 Arabidopsis thaliana
AT4G33700 0.5kb downstream 0.5kb downstream 3706 true Chr4: 16175776-16179481 Arabidopsis thaliana
AT4G33700 0.5kb downstream 0.5kb downstream 500 false Chr4: 16175776-16176275 Arabidopsis thaliana
AT4G33700 1.0kb upstream 1.0kb upstream 4206 true Chr4: 16176276-16180481 Arabidopsis thaliana
AT4G33700 1.0kb upstream 1.0kb upstream 1000 false Chr4: 16179482-16180481 Arabidopsis thaliana
AT4G33700 1.0kb downstream 1.0kb downstream 4206 true Chr4: 16175276-16179481 Arabidopsis thaliana
AT4G33700 1.0kb downstream 1.0kb downstream 1000 false Chr4: 16175276-16176275 Arabidopsis thaliana
AT4G33700 2.0kb upstream 2.0kb upstream 5206 true Chr4: 16176276-16181481 Arabidopsis thaliana
AT4G33700 2.0kb upstream 2.0kb upstream 2000 false Chr4: 16179482-16181481 Arabidopsis thaliana
AT4G33700 2.0kb downstream 2.0kb downstream 5206 true Chr4: 16174276-16179481 Arabidopsis thaliana
AT4G33700 2.0kb downstream 2.0kb downstream 2000 false Chr4: 16174276-16176275 Arabidopsis thaliana
AT4G33700 5.0kb upstream 5.0kb upstream 8206 true Chr4: 16176276-16184481 Arabidopsis thaliana
AT4G33700 5.0kb upstream 5.0kb upstream 5000 false Chr4: 16179482-16184481 Arabidopsis thaliana
AT4G33700 5.0kb downstream 5.0kb downstream 8206 true Chr4: 16171276-16179481 Arabidopsis thaliana
AT4G33700 5.0kb downstream 5.0kb downstream 5000 false Chr4: 16171276-16176275 Arabidopsis thaliana
AT4G33700 10.0kb upstream 10.0kb upstream 13206 true Chr4: 16176276-16189481 Arabidopsis thaliana
AT4G33700 10.0kb upstream 10.0kb upstream 10000 false Chr4: 16179482-16189481 Arabidopsis thaliana
AT4G33700 10.0kb downstream 10.0kb downstream 13206 true Chr4: 16166276-16179481 Arabidopsis thaliana
AT4G33700 10.0kb downstream 10.0kb downstream 10000 false Chr4: 16166276-16176275 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363253 5261 Brassicaceae View MSA
123841540 5264 Brassicales-Malvales View MSA
124342484 5266 SBM View MSA
124248968 5268 Malvidae View MSA
124071770 5270 Rosid View MSA
123746390 5271 Pentapetalae View MSA
122788672 5272 Eudicot View MSA
122046088 5273 Angiosperm View MSA
121348237 5274 Embryophyte View MSA
123426941 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.504        
cufflinks 23.843        
cufflinks 17.313        
cufflinks 25.013       High
cufflinks 14.598       Low
cufflinks 20.461        

0 Strain