Gene : AGD2 A. thaliana TAIR10
Primary Identifier:  ? AT4G33680 Defline:  (1 of 2) 2.6.1.83 - LL-diaminopimelate aminotransferase / LL-diaminopimelate transaminase
Genomic Order:  3442 Name:  ? AT4G33680
Secondary Identifier:  ? PAC:19648197
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-5097 Arabidopsis thaliana pathologic  
Athaliana PWY-724 Arabidopsis thaliana pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G33680 0.5kb upstream 0.5kb upstream 3493 true Chr4: 16171694-16175186 Arabidopsis thaliana
AT4G33680 0.5kb upstream 0.5kb upstream 500 false Chr4: 16174687-16175186 Arabidopsis thaliana
AT4G33680 0.5kb downstream 0.5kb downstream 3493 true Chr4: 16171194-16174686 Arabidopsis thaliana
AT4G33680 0.5kb downstream 0.5kb downstream 500 false Chr4: 16171194-16171693 Arabidopsis thaliana
AT4G33680 1.0kb upstream 1.0kb upstream 3993 true Chr4: 16171694-16175686 Arabidopsis thaliana
AT4G33680 1.0kb upstream 1.0kb upstream 1000 false Chr4: 16174687-16175686 Arabidopsis thaliana
AT4G33680 1.0kb downstream 1.0kb downstream 3993 true Chr4: 16170694-16174686 Arabidopsis thaliana
AT4G33680 1.0kb downstream 1.0kb downstream 1000 false Chr4: 16170694-16171693 Arabidopsis thaliana
AT4G33680 2.0kb upstream 2.0kb upstream 4993 true Chr4: 16171694-16176686 Arabidopsis thaliana
AT4G33680 2.0kb upstream 2.0kb upstream 2000 false Chr4: 16174687-16176686 Arabidopsis thaliana
AT4G33680 2.0kb downstream 2.0kb downstream 4993 true Chr4: 16169694-16174686 Arabidopsis thaliana
AT4G33680 2.0kb downstream 2.0kb downstream 2000 false Chr4: 16169694-16171693 Arabidopsis thaliana
AT4G33680 5.0kb upstream 5.0kb upstream 7993 true Chr4: 16171694-16179686 Arabidopsis thaliana
AT4G33680 5.0kb upstream 5.0kb upstream 5000 false Chr4: 16174687-16179686 Arabidopsis thaliana
AT4G33680 5.0kb downstream 5.0kb downstream 7993 true Chr4: 16166694-16174686 Arabidopsis thaliana
AT4G33680 5.0kb downstream 5.0kb downstream 5000 false Chr4: 16166694-16171693 Arabidopsis thaliana
AT4G33680 10.0kb upstream 10.0kb upstream 12993 true Chr4: 16171694-16184686 Arabidopsis thaliana
AT4G33680 10.0kb upstream 10.0kb upstream 10000 false Chr4: 16174687-16184686 Arabidopsis thaliana
AT4G33680 10.0kb downstream 10.0kb downstream 12993 true Chr4: 16161694-16174686 Arabidopsis thaliana
AT4G33680 10.0kb downstream 10.0kb downstream 10000 false Chr4: 16161694-16171693 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365639 5261 Brassicaceae View MSA
123833464 5264 Brassicales-Malvales View MSA
124338935 5266 SBM View MSA
124252486 5268 Malvidae View MSA
124071170 5270 Rosid View MSA
123740014 5271 Pentapetalae View MSA
122788260 5272 Eudicot View MSA
122045161 5273 Angiosperm View MSA
121344343 5274 Embryophyte View MSA
123424947 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 40.838     High  
cufflinks 15.911       Low
cufflinks 50.588     High High
cufflinks 18.097        
cufflinks 42.533     High  
cufflinks 21.753        

0 Strain