Gene : AT4G33500 A. thaliana TAIR10
Defline:  (1 of 1) PTHR12320:SF9 - PROTEIN PHOSPHATASE 2C 62-RELATED Genomic Order:  3421
Name:  ? AT4G33500 Secondary Identifier:  ? PAC:19646643
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G33500 0.5kb upstream 0.5kb upstream 4191 true Chr4: 16112658-16116848 Arabidopsis thaliana
AT4G33500 0.5kb upstream 0.5kb upstream 500 false Chr4: 16116349-16116848 Arabidopsis thaliana
AT4G33500 0.5kb downstream 0.5kb downstream 4191 true Chr4: 16112158-16116348 Arabidopsis thaliana
AT4G33500 0.5kb downstream 0.5kb downstream 500 false Chr4: 16112158-16112657 Arabidopsis thaliana
AT4G33500 1.0kb upstream 1.0kb upstream 4691 true Chr4: 16112658-16117348 Arabidopsis thaliana
AT4G33500 1.0kb upstream 1.0kb upstream 1000 false Chr4: 16116349-16117348 Arabidopsis thaliana
AT4G33500 1.0kb downstream 1.0kb downstream 4691 true Chr4: 16111658-16116348 Arabidopsis thaliana
AT4G33500 1.0kb downstream 1.0kb downstream 1000 false Chr4: 16111658-16112657 Arabidopsis thaliana
AT4G33500 2.0kb upstream 2.0kb upstream 5691 true Chr4: 16112658-16118348 Arabidopsis thaliana
AT4G33500 2.0kb upstream 2.0kb upstream 2000 false Chr4: 16116349-16118348 Arabidopsis thaliana
AT4G33500 2.0kb downstream 2.0kb downstream 5691 true Chr4: 16110658-16116348 Arabidopsis thaliana
AT4G33500 2.0kb downstream 2.0kb downstream 2000 false Chr4: 16110658-16112657 Arabidopsis thaliana
AT4G33500 5.0kb upstream 5.0kb upstream 8691 true Chr4: 16112658-16121348 Arabidopsis thaliana
AT4G33500 5.0kb upstream 5.0kb upstream 5000 false Chr4: 16116349-16121348 Arabidopsis thaliana
AT4G33500 5.0kb downstream 5.0kb downstream 8691 true Chr4: 16107658-16116348 Arabidopsis thaliana
AT4G33500 5.0kb downstream 5.0kb downstream 5000 false Chr4: 16107658-16112657 Arabidopsis thaliana
AT4G33500 10.0kb upstream 10.0kb upstream 13691 true Chr4: 16112658-16126348 Arabidopsis thaliana
AT4G33500 10.0kb upstream 10.0kb upstream 10000 false Chr4: 16116349-16126348 Arabidopsis thaliana
AT4G33500 10.0kb downstream 10.0kb downstream 13691 true Chr4: 16102658-16116348 Arabidopsis thaliana
AT4G33500 10.0kb downstream 10.0kb downstream 10000 false Chr4: 16102658-16112657 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376220 5261 Brassicaceae View MSA
123837640 5264 Brassicales-Malvales View MSA
124322341 5266 SBM View MSA
124244510 5268 Malvidae View MSA
124063620 5270 Rosid View MSA
123740753 5271 Pentapetalae View MSA
122796169 5272 Eudicot View MSA
122049301 5273 Angiosperm View MSA
121351334 5274 Embryophyte View MSA
123428574 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 29.301     High  
cufflinks 7.211        
cufflinks 29.13     High  
cufflinks 6.597        
cufflinks 24.629        
cufflinks 5.295       Low

0 Strain