Gene : AT4G33560 A. thaliana TAIR10
Defline:  (1 of 6) PF12609 - Wound-induced protein (DUF3774) Genomic Order:  3427
Name:  ? AT4G33560 Secondary Identifier:  ? PAC:19644429
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G33560 0.5kb upstream 0.5kb upstream 1015 true Chr4: 16134900-16135914 Arabidopsis thaliana
AT4G33560 0.5kb upstream 0.5kb upstream 500 false Chr4: 16134900-16135399 Arabidopsis thaliana
AT4G33560 0.5kb downstream 0.5kb downstream 1015 true Chr4: 16135400-16136414 Arabidopsis thaliana
AT4G33560 0.5kb downstream 0.5kb downstream 500 false Chr4: 16135915-16136414 Arabidopsis thaliana
AT4G33560 1.0kb upstream 1.0kb upstream 1515 true Chr4: 16134400-16135914 Arabidopsis thaliana
AT4G33560 1.0kb upstream 1.0kb upstream 1000 false Chr4: 16134400-16135399 Arabidopsis thaliana
AT4G33560 1.0kb downstream 1.0kb downstream 1515 true Chr4: 16135400-16136914 Arabidopsis thaliana
AT4G33560 1.0kb downstream 1.0kb downstream 1000 false Chr4: 16135915-16136914 Arabidopsis thaliana
AT4G33560 2.0kb upstream 2.0kb upstream 2515 true Chr4: 16133400-16135914 Arabidopsis thaliana
AT4G33560 2.0kb upstream 2.0kb upstream 2000 false Chr4: 16133400-16135399 Arabidopsis thaliana
AT4G33560 2.0kb downstream 2.0kb downstream 2515 true Chr4: 16135400-16137914 Arabidopsis thaliana
AT4G33560 2.0kb downstream 2.0kb downstream 2000 false Chr4: 16135915-16137914 Arabidopsis thaliana
AT4G33560 5.0kb upstream 5.0kb upstream 5515 true Chr4: 16130400-16135914 Arabidopsis thaliana
AT4G33560 5.0kb upstream 5.0kb upstream 5000 false Chr4: 16130400-16135399 Arabidopsis thaliana
AT4G33560 5.0kb downstream 5.0kb downstream 5515 true Chr4: 16135400-16140914 Arabidopsis thaliana
AT4G33560 5.0kb downstream 5.0kb downstream 5000 false Chr4: 16135915-16140914 Arabidopsis thaliana
AT4G33560 10.0kb upstream 10.0kb upstream 10515 true Chr4: 16125400-16135914 Arabidopsis thaliana
AT4G33560 10.0kb upstream 10.0kb upstream 10000 false Chr4: 16125400-16135399 Arabidopsis thaliana
AT4G33560 10.0kb downstream 10.0kb downstream 10515 true Chr4: 16135400-16145914 Arabidopsis thaliana
AT4G33560 10.0kb downstream 10.0kb downstream 10000 false Chr4: 16135915-16145914 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380666 5261 Brassicaceae View MSA
123802839 5264 Brassicales-Malvales View MSA
124300002 5266 SBM View MSA
124151285 5268 Malvidae View MSA
123876752 5270 Rosid View MSA
123752269 5271 Pentapetalae View MSA
122786865 5272 Eudicot View MSA
122051043 5273 Angiosperm View MSA
121312265 5274 Embryophyte View MSA
123349454 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.531        
cufflinks 1.53        
cufflinks 0.25     Low Low
cufflinks 1.666        
cufflinks 0.265       Low
cufflinks 1.928       High

0 Strain