Gene : PGSIP3 A. thaliana TAIR10
Primary Identifier:  ? AT4G33330 Defline:  (1 of 1) PTHR11183:SF44 - UDP-GLUCURONATE:XYLAN ALPHA-GLUCURONOSYLTRANSFERASE 2
Genomic Order:  3401 Name:  ? AT4G33330
Secondary Identifier:  ? PAC:19644567
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G33330 0.5kb upstream 0.5kb upstream 3817 true Chr4: 16059754-16063570 Arabidopsis thaliana
AT4G33330 0.5kb upstream 0.5kb upstream 500 false Chr4: 16063071-16063570 Arabidopsis thaliana
AT4G33330 0.5kb downstream 0.5kb downstream 3817 true Chr4: 16059254-16063070 Arabidopsis thaliana
AT4G33330 0.5kb downstream 0.5kb downstream 500 false Chr4: 16059254-16059753 Arabidopsis thaliana
AT4G33330 1.0kb upstream 1.0kb upstream 4317 true Chr4: 16059754-16064070 Arabidopsis thaliana
AT4G33330 1.0kb upstream 1.0kb upstream 1000 false Chr4: 16063071-16064070 Arabidopsis thaliana
AT4G33330 1.0kb downstream 1.0kb downstream 4317 true Chr4: 16058754-16063070 Arabidopsis thaliana
AT4G33330 1.0kb downstream 1.0kb downstream 1000 false Chr4: 16058754-16059753 Arabidopsis thaliana
AT4G33330 2.0kb upstream 2.0kb upstream 5317 true Chr4: 16059754-16065070 Arabidopsis thaliana
AT4G33330 2.0kb upstream 2.0kb upstream 2000 false Chr4: 16063071-16065070 Arabidopsis thaliana
AT4G33330 2.0kb downstream 2.0kb downstream 5317 true Chr4: 16057754-16063070 Arabidopsis thaliana
AT4G33330 2.0kb downstream 2.0kb downstream 2000 false Chr4: 16057754-16059753 Arabidopsis thaliana
AT4G33330 5.0kb upstream 5.0kb upstream 8317 true Chr4: 16059754-16068070 Arabidopsis thaliana
AT4G33330 5.0kb upstream 5.0kb upstream 5000 false Chr4: 16063071-16068070 Arabidopsis thaliana
AT4G33330 5.0kb downstream 5.0kb downstream 8317 true Chr4: 16054754-16063070 Arabidopsis thaliana
AT4G33330 5.0kb downstream 5.0kb downstream 5000 false Chr4: 16054754-16059753 Arabidopsis thaliana
AT4G33330 10.0kb upstream 10.0kb upstream 13317 true Chr4: 16059754-16073070 Arabidopsis thaliana
AT4G33330 10.0kb upstream 10.0kb upstream 10000 false Chr4: 16063071-16073070 Arabidopsis thaliana
AT4G33330 10.0kb downstream 10.0kb downstream 13317 true Chr4: 16049754-16063070 Arabidopsis thaliana
AT4G33330 10.0kb downstream 10.0kb downstream 10000 false Chr4: 16049754-16059753 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366702 5261 Brassicaceae View MSA
123831090 5264 Brassicales-Malvales View MSA
124344268 5266 SBM View MSA
124241064 5268 Malvidae View MSA
124065974 5270 Rosid View MSA
123740056 5271 Pentapetalae View MSA
122792981 5272 Eudicot View MSA
122049566 5273 Angiosperm View MSA
121311478 5274 Embryophyte View MSA
123348771 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.087     Low Low
cufflinks 1.561        
cufflinks 0.134     Low  
cufflinks 2.025        
cufflinks 0.12     Low  
cufflinks 2.411       High

0 Strain