Gene : AT4G33280 A. thaliana TAIR10
Defline:  (1 of 92) PF02362 - B3 DNA binding domain (B3) Genomic Order:  3396
Name:  ? AT4G33280 Secondary Identifier:  ? PAC:19644758
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G33280 0.5kb upstream 0.5kb upstream 2502 true Chr4: 16047354-16049855 Arabidopsis thaliana
AT4G33280 0.5kb upstream 0.5kb upstream 500 false Chr4: 16049356-16049855 Arabidopsis thaliana
AT4G33280 0.5kb downstream 0.5kb downstream 2502 true Chr4: 16046854-16049355 Arabidopsis thaliana
AT4G33280 0.5kb downstream 0.5kb downstream 500 false Chr4: 16046854-16047353 Arabidopsis thaliana
AT4G33280 1.0kb upstream 1.0kb upstream 3002 true Chr4: 16047354-16050355 Arabidopsis thaliana
AT4G33280 1.0kb upstream 1.0kb upstream 1000 false Chr4: 16049356-16050355 Arabidopsis thaliana
AT4G33280 1.0kb downstream 1.0kb downstream 3002 true Chr4: 16046354-16049355 Arabidopsis thaliana
AT4G33280 1.0kb downstream 1.0kb downstream 1000 false Chr4: 16046354-16047353 Arabidopsis thaliana
AT4G33280 2.0kb upstream 2.0kb upstream 4002 true Chr4: 16047354-16051355 Arabidopsis thaliana
AT4G33280 2.0kb upstream 2.0kb upstream 2000 false Chr4: 16049356-16051355 Arabidopsis thaliana
AT4G33280 2.0kb downstream 2.0kb downstream 4002 true Chr4: 16045354-16049355 Arabidopsis thaliana
AT4G33280 2.0kb downstream 2.0kb downstream 2000 false Chr4: 16045354-16047353 Arabidopsis thaliana
AT4G33280 5.0kb upstream 5.0kb upstream 7002 true Chr4: 16047354-16054355 Arabidopsis thaliana
AT4G33280 5.0kb upstream 5.0kb upstream 5000 false Chr4: 16049356-16054355 Arabidopsis thaliana
AT4G33280 5.0kb downstream 5.0kb downstream 7002 true Chr4: 16042354-16049355 Arabidopsis thaliana
AT4G33280 5.0kb downstream 5.0kb downstream 5000 false Chr4: 16042354-16047353 Arabidopsis thaliana
AT4G33280 10.0kb upstream 10.0kb upstream 12002 true Chr4: 16047354-16059355 Arabidopsis thaliana
AT4G33280 10.0kb upstream 10.0kb upstream 10000 false Chr4: 16049356-16059355 Arabidopsis thaliana
AT4G33280 10.0kb downstream 10.0kb downstream 12002 true Chr4: 16037354-16049355 Arabidopsis thaliana
AT4G33280 10.0kb downstream 10.0kb downstream 10000 false Chr4: 16037354-16047353 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122330437 5261 Brassicaceae Singleton cluster - no MSA
123836856 5264 Brassicales-Malvales View MSA
124322216 5266 SBM View MSA
124253027 5268 Malvidae View MSA
124073823 5270 Rosid View MSA
123753418 5271 Pentapetalae View MSA
122797829 5272 Eudicot View MSA
122050133 5273 Angiosperm View MSA
121350826 5274 Embryophyte View MSA
123427153 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.044     Low High
cufflinks 0.015     Low  
cufflinks 0.015     Low  
cufflinks 0.031     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain