Gene : AT4G33380 A. thaliana TAIR10
Genomic Order:  3406 Name:  ? AT4G33380
Secondary Identifier:  ? PAC:19644438
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G33380 0.5kb upstream 0.5kb upstream 3693 true Chr4: 16071302-16074994 Arabidopsis thaliana
AT4G33380 0.5kb upstream 0.5kb upstream 500 false Chr4: 16071302-16071801 Arabidopsis thaliana
AT4G33380 0.5kb downstream 0.5kb downstream 3693 true Chr4: 16071802-16075494 Arabidopsis thaliana
AT4G33380 0.5kb downstream 0.5kb downstream 500 false Chr4: 16074995-16075494 Arabidopsis thaliana
AT4G33380 1.0kb upstream 1.0kb upstream 4193 true Chr4: 16070802-16074994 Arabidopsis thaliana
AT4G33380 1.0kb upstream 1.0kb upstream 1000 false Chr4: 16070802-16071801 Arabidopsis thaliana
AT4G33380 1.0kb downstream 1.0kb downstream 4193 true Chr4: 16071802-16075994 Arabidopsis thaliana
AT4G33380 1.0kb downstream 1.0kb downstream 1000 false Chr4: 16074995-16075994 Arabidopsis thaliana
AT4G33380 2.0kb upstream 2.0kb upstream 5193 true Chr4: 16069802-16074994 Arabidopsis thaliana
AT4G33380 2.0kb upstream 2.0kb upstream 2000 false Chr4: 16069802-16071801 Arabidopsis thaliana
AT4G33380 2.0kb downstream 2.0kb downstream 5193 true Chr4: 16071802-16076994 Arabidopsis thaliana
AT4G33380 2.0kb downstream 2.0kb downstream 2000 false Chr4: 16074995-16076994 Arabidopsis thaliana
AT4G33380 5.0kb upstream 5.0kb upstream 8193 true Chr4: 16066802-16074994 Arabidopsis thaliana
AT4G33380 5.0kb upstream 5.0kb upstream 5000 false Chr4: 16066802-16071801 Arabidopsis thaliana
AT4G33380 5.0kb downstream 5.0kb downstream 8193 true Chr4: 16071802-16079994 Arabidopsis thaliana
AT4G33380 5.0kb downstream 5.0kb downstream 5000 false Chr4: 16074995-16079994 Arabidopsis thaliana
AT4G33380 10.0kb upstream 10.0kb upstream 13193 true Chr4: 16061802-16074994 Arabidopsis thaliana
AT4G33380 10.0kb upstream 10.0kb upstream 10000 false Chr4: 16061802-16071801 Arabidopsis thaliana
AT4G33380 10.0kb downstream 10.0kb downstream 13193 true Chr4: 16071802-16084994 Arabidopsis thaliana
AT4G33380 10.0kb downstream 10.0kb downstream 10000 false Chr4: 16074995-16084994 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365891 5261 Brassicaceae View MSA
123830229 5264 Brassicales-Malvales View MSA
124344717 5266 SBM View MSA
124242818 5268 Malvidae View MSA
124069098 5270 Rosid View MSA
123737293 5271 Pentapetalae View MSA
122785804 5272 Eudicot View MSA
122047056 5273 Angiosperm View MSA
123428953 5275 Viridiplantae View MSA
121348504 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.311       Low
cufflinks 13.403       High
cufflinks 11.034        
cufflinks 12.219        
cufflinks 10.35        
cufflinks 12.065        

0 Strain