Gene : SLOMO A. thaliana TAIR10
Primary Identifier:  ? AT4G33210 Defline:  (1 of 1) PTHR24006:SF502 - F-BOX/LRR-REPEAT PROTEIN 15-RELATED
Genomic Order:  3389 Name:  ? AT4G33210
Secondary Identifier:  ? PAC:19643777
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G33210 0.5kb upstream 0.5kb upstream 5600 true Chr4: 16015730-16021329 Arabidopsis thaliana
AT4G33210 0.5kb upstream 0.5kb upstream 500 false Chr4: 16020830-16021329 Arabidopsis thaliana
AT4G33210 0.5kb downstream 0.5kb downstream 5600 true Chr4: 16015230-16020829 Arabidopsis thaliana
AT4G33210 0.5kb downstream 0.5kb downstream 500 false Chr4: 16015230-16015729 Arabidopsis thaliana
AT4G33210 1.0kb upstream 1.0kb upstream 6100 true Chr4: 16015730-16021829 Arabidopsis thaliana
AT4G33210 1.0kb upstream 1.0kb upstream 1000 false Chr4: 16020830-16021829 Arabidopsis thaliana
AT4G33210 1.0kb downstream 1.0kb downstream 6100 true Chr4: 16014730-16020829 Arabidopsis thaliana
AT4G33210 1.0kb downstream 1.0kb downstream 1000 false Chr4: 16014730-16015729 Arabidopsis thaliana
AT4G33210 2.0kb upstream 2.0kb upstream 7100 true Chr4: 16015730-16022829 Arabidopsis thaliana
AT4G33210 2.0kb upstream 2.0kb upstream 2000 false Chr4: 16020830-16022829 Arabidopsis thaliana
AT4G33210 2.0kb downstream 2.0kb downstream 7100 true Chr4: 16013730-16020829 Arabidopsis thaliana
AT4G33210 2.0kb downstream 2.0kb downstream 2000 false Chr4: 16013730-16015729 Arabidopsis thaliana
AT4G33210 5.0kb upstream 5.0kb upstream 10100 true Chr4: 16015730-16025829 Arabidopsis thaliana
AT4G33210 5.0kb upstream 5.0kb upstream 5000 false Chr4: 16020830-16025829 Arabidopsis thaliana
AT4G33210 5.0kb downstream 5.0kb downstream 10100 true Chr4: 16010730-16020829 Arabidopsis thaliana
AT4G33210 5.0kb downstream 5.0kb downstream 5000 false Chr4: 16010730-16015729 Arabidopsis thaliana
AT4G33210 10.0kb upstream 10.0kb upstream 15100 true Chr4: 16015730-16030829 Arabidopsis thaliana
AT4G33210 10.0kb upstream 10.0kb upstream 10000 false Chr4: 16020830-16030829 Arabidopsis thaliana
AT4G33210 10.0kb downstream 10.0kb downstream 15100 true Chr4: 16005730-16020829 Arabidopsis thaliana
AT4G33210 10.0kb downstream 10.0kb downstream 10000 false Chr4: 16005730-16015729 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379546 5261 Brassicaceae View MSA
123836252 5264 Brassicales-Malvales View MSA
124337335 5266 SBM View MSA
124242211 5268 Malvidae View MSA
124065203 5270 Rosid View MSA
123738789 5271 Pentapetalae View MSA
122785626 5272 Eudicot View MSA
122046076 5273 Angiosperm View MSA
123428966 5275 Viridiplantae View MSA
121348124 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.48       Low
cufflinks 21.022        
cufflinks 19.537        
cufflinks 22.986       High
cufflinks 23.331       High
cufflinks 18.956        

0 Strain