Gene : EDA39 A. thaliana TAIR10
Primary Identifier:  ? AT4G33050 Defline:  (1 of 2) PTHR31250:SF13 - CALMODULIN-BINDING PROTEIN
Genomic Order:  3373 Name:  ? AT4G33050
Secondary Identifier:  ? PAC:19647693
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G33050 0.5kb upstream 0.5kb upstream 3205 true Chr4: 15944322-15947526 Arabidopsis thaliana
AT4G33050 0.5kb upstream 0.5kb upstream 500 false Chr4: 15947027-15947526 Arabidopsis thaliana
AT4G33050 0.5kb downstream 0.5kb downstream 3205 true Chr4: 15943822-15947026 Arabidopsis thaliana
AT4G33050 0.5kb downstream 0.5kb downstream 500 false Chr4: 15943822-15944321 Arabidopsis thaliana
AT4G33050 1.0kb upstream 1.0kb upstream 3705 true Chr4: 15944322-15948026 Arabidopsis thaliana
AT4G33050 1.0kb upstream 1.0kb upstream 1000 false Chr4: 15947027-15948026 Arabidopsis thaliana
AT4G33050 1.0kb downstream 1.0kb downstream 3705 true Chr4: 15943322-15947026 Arabidopsis thaliana
AT4G33050 1.0kb downstream 1.0kb downstream 1000 false Chr4: 15943322-15944321 Arabidopsis thaliana
AT4G33050 2.0kb upstream 2.0kb upstream 4705 true Chr4: 15944322-15949026 Arabidopsis thaliana
AT4G33050 2.0kb upstream 2.0kb upstream 2000 false Chr4: 15947027-15949026 Arabidopsis thaliana
AT4G33050 2.0kb downstream 2.0kb downstream 4705 true Chr4: 15942322-15947026 Arabidopsis thaliana
AT4G33050 2.0kb downstream 2.0kb downstream 2000 false Chr4: 15942322-15944321 Arabidopsis thaliana
AT4G33050 5.0kb upstream 5.0kb upstream 7705 true Chr4: 15944322-15952026 Arabidopsis thaliana
AT4G33050 5.0kb upstream 5.0kb upstream 5000 false Chr4: 15947027-15952026 Arabidopsis thaliana
AT4G33050 5.0kb downstream 5.0kb downstream 7705 true Chr4: 15939322-15947026 Arabidopsis thaliana
AT4G33050 5.0kb downstream 5.0kb downstream 5000 false Chr4: 15939322-15944321 Arabidopsis thaliana
AT4G33050 10.0kb upstream 10.0kb upstream 12705 true Chr4: 15944322-15957026 Arabidopsis thaliana
AT4G33050 10.0kb upstream 10.0kb upstream 10000 false Chr4: 15947027-15957026 Arabidopsis thaliana
AT4G33050 10.0kb downstream 10.0kb downstream 12705 true Chr4: 15934322-15947026 Arabidopsis thaliana
AT4G33050 10.0kb downstream 10.0kb downstream 10000 false Chr4: 15934322-15944321 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381097 5261 Brassicaceae View MSA
123839090 5264 Brassicales-Malvales View MSA
124347130 5266 SBM View MSA
124254117 5268 Malvidae View MSA
124069504 5270 Rosid View MSA
123741985 5271 Pentapetalae View MSA
122797259 5272 Eudicot View MSA
122041581 5273 Angiosperm View MSA
121351725 5274 Embryophyte View MSA
123382293 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 28.728     High High
cufflinks 2.134        
cufflinks 10.813        
cufflinks 3.36        
cufflinks 15.532        
cufflinks 1.341       Low

0 Strain