Gene : AT4G32920 A. thaliana TAIR10

Defline:  (1 of 2) PTHR31513//PTHR31513:SF1 - FAMILY NOT NAMED // GLYCINE-RICH PROTEIN Genomic Order:  3359
Name:  ? AT4G32920 Secondary Identifier:  ? PAC:19645178

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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G32920 0.5kb upstream 0.5kb upstream 9237 true Chr4: 15887270-15896506 Arabidopsis thaliana
AT4G32920 0.5kb upstream 0.5kb upstream 500 false Chr4: 15896007-15896506 Arabidopsis thaliana
AT4G32920 0.5kb downstream 0.5kb downstream 9237 true Chr4: 15886770-15896006 Arabidopsis thaliana
AT4G32920 0.5kb downstream 0.5kb downstream 500 false Chr4: 15886770-15887269 Arabidopsis thaliana
AT4G32920 1.0kb upstream 1.0kb upstream 9737 true Chr4: 15887270-15897006 Arabidopsis thaliana
AT4G32920 1.0kb upstream 1.0kb upstream 1000 false Chr4: 15896007-15897006 Arabidopsis thaliana
AT4G32920 1.0kb downstream 1.0kb downstream 9737 true Chr4: 15886270-15896006 Arabidopsis thaliana
AT4G32920 1.0kb downstream 1.0kb downstream 1000 false Chr4: 15886270-15887269 Arabidopsis thaliana
AT4G32920 2.0kb upstream 2.0kb upstream 10737 true Chr4: 15887270-15898006 Arabidopsis thaliana
AT4G32920 2.0kb upstream 2.0kb upstream 2000 false Chr4: 15896007-15898006 Arabidopsis thaliana
AT4G32920 2.0kb downstream 2.0kb downstream 10737 true Chr4: 15885270-15896006 Arabidopsis thaliana
AT4G32920 2.0kb downstream 2.0kb downstream 2000 false Chr4: 15885270-15887269 Arabidopsis thaliana
AT4G32920 5.0kb upstream 5.0kb upstream 13737 true Chr4: 15887270-15901006 Arabidopsis thaliana
AT4G32920 5.0kb upstream 5.0kb upstream 5000 false Chr4: 15896007-15901006 Arabidopsis thaliana
AT4G32920 5.0kb downstream 5.0kb downstream 13737 true Chr4: 15882270-15896006 Arabidopsis thaliana
AT4G32920 5.0kb downstream 5.0kb downstream 5000 false Chr4: 15882270-15887269 Arabidopsis thaliana
AT4G32920 10.0kb upstream 10.0kb upstream 18737 true Chr4: 15887270-15906006 Arabidopsis thaliana
AT4G32920 10.0kb upstream 10.0kb upstream 10000 false Chr4: 15896007-15906006 Arabidopsis thaliana
AT4G32920 10.0kb downstream 10.0kb downstream 18737 true Chr4: 15877270-15896006 Arabidopsis thaliana
AT4G32920 10.0kb downstream 10.0kb downstream 10000 false Chr4: 15877270-15887269 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366818 5261 Brassicaceae View MSA
123839746 5264 Brassicales-Malvales View MSA
124351109 5266 SBM View MSA
124251590 5268 Malvidae View MSA
124073287 5270 Rosid View MSA
123741641 5271 Pentapetalae View MSA
122787770 5272 Eudicot View MSA
122043442 5273 Angiosperm View MSA
121344544 5274 Embryophyte View MSA
123380062 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.881       Low
cufflinks 1.799        
cufflinks 1.334        
cufflinks 1.939       High
cufflinks 1.212        
cufflinks 1.425        

0 Strain