Gene : ACO1 A. thaliana TAIR10
Primary Identifier:  ? AT4G35830 Defline:  (1 of 1) PTHR11670//PTHR11670:SF40 - ACONITASE // ACONITATE HYDRATASE 1
Genomic Order:  3677 Name:  ? AT4G35830
Secondary Identifier:  ? PAC:19644086
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5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana GLYOXYLATE-BYPASS Arabidopsis thaliana pathologic  
Athaliana PWY-5464 Arabidopsis thaliana pathologic  
Athaliana PWY-561 Arabidopsis thaliana pathologic  
Athaliana PWY-5690 Arabidopsis thaliana pathologic  
Athaliana PWY-6549 Arabidopsis thaliana pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G35830 0.5kb upstream 0.5kb upstream 5960 true Chr4: 16972598-16978557 Arabidopsis thaliana
AT4G35830 0.5kb upstream 0.5kb upstream 500 false Chr4: 16978058-16978557 Arabidopsis thaliana
AT4G35830 0.5kb downstream 0.5kb downstream 5960 true Chr4: 16972098-16978057 Arabidopsis thaliana
AT4G35830 0.5kb downstream 0.5kb downstream 500 false Chr4: 16972098-16972597 Arabidopsis thaliana
AT4G35830 1.0kb upstream 1.0kb upstream 6460 true Chr4: 16972598-16979057 Arabidopsis thaliana
AT4G35830 1.0kb upstream 1.0kb upstream 1000 false Chr4: 16978058-16979057 Arabidopsis thaliana
AT4G35830 1.0kb downstream 1.0kb downstream 6460 true Chr4: 16971598-16978057 Arabidopsis thaliana
AT4G35830 1.0kb downstream 1.0kb downstream 1000 false Chr4: 16971598-16972597 Arabidopsis thaliana
AT4G35830 2.0kb upstream 2.0kb upstream 7460 true Chr4: 16972598-16980057 Arabidopsis thaliana
AT4G35830 2.0kb upstream 2.0kb upstream 2000 false Chr4: 16978058-16980057 Arabidopsis thaliana
AT4G35830 2.0kb downstream 2.0kb downstream 7460 true Chr4: 16970598-16978057 Arabidopsis thaliana
AT4G35830 2.0kb downstream 2.0kb downstream 2000 false Chr4: 16970598-16972597 Arabidopsis thaliana
AT4G35830 5.0kb upstream 5.0kb upstream 10460 true Chr4: 16972598-16983057 Arabidopsis thaliana
AT4G35830 5.0kb upstream 5.0kb upstream 5000 false Chr4: 16978058-16983057 Arabidopsis thaliana
AT4G35830 5.0kb downstream 5.0kb downstream 10460 true Chr4: 16967598-16978057 Arabidopsis thaliana
AT4G35830 5.0kb downstream 5.0kb downstream 5000 false Chr4: 16967598-16972597 Arabidopsis thaliana
AT4G35830 10.0kb upstream 10.0kb upstream 15460 true Chr4: 16972598-16988057 Arabidopsis thaliana
AT4G35830 10.0kb upstream 10.0kb upstream 10000 false Chr4: 16978058-16988057 Arabidopsis thaliana
AT4G35830 10.0kb downstream 10.0kb downstream 15460 true Chr4: 16962598-16978057 Arabidopsis thaliana
AT4G35830 10.0kb downstream 10.0kb downstream 10000 false Chr4: 16962598-16972597 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379394 5261 Brassicaceae View MSA
123836959 5264 Brassicales-Malvales View MSA
124346925 5266 SBM View MSA
124245948 5268 Malvidae View MSA
124069604 5270 Rosid View MSA
123752886 5271 Pentapetalae View MSA
122795491 5272 Eudicot View MSA
122043810 5273 Angiosperm View MSA
121344247 5274 Embryophyte View MSA
123428745 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 35.231     High Low
cufflinks 43.643     High  
cufflinks 57.383     High  
cufflinks 48.71     High  
cufflinks 76.832     High High
cufflinks 44.122     High  

0 Strain