Gene : AT4G35730 A. thaliana TAIR10
Defline:  (1 of 1) PTHR12161//PTHR12161:SF19 - UNCHARACTERIZED DUF292 // REGULATOR OF VPS4 ACTIVITY IN THE MVB PATHWAY PROTEIN Genomic Order:  3664
Name:  ? AT4G35730 Secondary Identifier:  ? PAC:19648184
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G35730 0.5kb upstream 0.5kb upstream 2818 true Chr4: 16930539-16933356 Arabidopsis thaliana
AT4G35730 0.5kb upstream 0.5kb upstream 500 false Chr4: 16930539-16931038 Arabidopsis thaliana
AT4G35730 0.5kb downstream 0.5kb downstream 2818 true Chr4: 16931039-16933856 Arabidopsis thaliana
AT4G35730 0.5kb downstream 0.5kb downstream 500 false Chr4: 16933357-16933856 Arabidopsis thaliana
AT4G35730 1.0kb upstream 1.0kb upstream 3318 true Chr4: 16930039-16933356 Arabidopsis thaliana
AT4G35730 1.0kb upstream 1.0kb upstream 1000 false Chr4: 16930039-16931038 Arabidopsis thaliana
AT4G35730 1.0kb downstream 1.0kb downstream 3318 true Chr4: 16931039-16934356 Arabidopsis thaliana
AT4G35730 1.0kb downstream 1.0kb downstream 1000 false Chr4: 16933357-16934356 Arabidopsis thaliana
AT4G35730 2.0kb upstream 2.0kb upstream 4318 true Chr4: 16929039-16933356 Arabidopsis thaliana
AT4G35730 2.0kb upstream 2.0kb upstream 2000 false Chr4: 16929039-16931038 Arabidopsis thaliana
AT4G35730 2.0kb downstream 2.0kb downstream 4318 true Chr4: 16931039-16935356 Arabidopsis thaliana
AT4G35730 2.0kb downstream 2.0kb downstream 2000 false Chr4: 16933357-16935356 Arabidopsis thaliana
AT4G35730 5.0kb upstream 5.0kb upstream 7318 true Chr4: 16926039-16933356 Arabidopsis thaliana
AT4G35730 5.0kb upstream 5.0kb upstream 5000 false Chr4: 16926039-16931038 Arabidopsis thaliana
AT4G35730 5.0kb downstream 5.0kb downstream 7318 true Chr4: 16931039-16938356 Arabidopsis thaliana
AT4G35730 5.0kb downstream 5.0kb downstream 5000 false Chr4: 16933357-16938356 Arabidopsis thaliana
AT4G35730 10.0kb upstream 10.0kb upstream 12318 true Chr4: 16921039-16933356 Arabidopsis thaliana
AT4G35730 10.0kb upstream 10.0kb upstream 10000 false Chr4: 16921039-16931038 Arabidopsis thaliana
AT4G35730 10.0kb downstream 10.0kb downstream 12318 true Chr4: 16931039-16943356 Arabidopsis thaliana
AT4G35730 10.0kb downstream 10.0kb downstream 10000 false Chr4: 16933357-16943356 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026573 5273 Angiosperm View MSA
122361871 5261 Brassicaceae View MSA
123834169 5264 Brassicales-Malvales View MSA
124321930 5266 SBM View MSA
124241944 5268 Malvidae View MSA
124050952 5270 Rosid View MSA
123738388 5271 Pentapetalae View MSA
122790971 5272 Eudicot View MSA
121350449 5274 Embryophyte View MSA
123424640 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.198        
cufflinks 15.724        
cufflinks 2.949        
cufflinks 10.683        
cufflinks 1.493       Low
cufflinks 23.946       High

0 Strain