Gene : RHA3B A. thaliana TAIR10
Primary Identifier:  ? AT4G35480 Defline:  (1 of 247) PF13639 - Ring finger domain (zf-RING_2)
Genomic Order:  3635 Name:  ? AT4G35480
Secondary Identifier:  ? PAC:19644901
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G35480 0.5kb upstream 0.5kb upstream 1374 true Chr4: 16852074-16853447 Arabidopsis thaliana
AT4G35480 0.5kb upstream 0.5kb upstream 500 false Chr4: 16852948-16853447 Arabidopsis thaliana
AT4G35480 0.5kb downstream 0.5kb downstream 1374 true Chr4: 16851574-16852947 Arabidopsis thaliana
AT4G35480 0.5kb downstream 0.5kb downstream 500 false Chr4: 16851574-16852073 Arabidopsis thaliana
AT4G35480 1.0kb upstream 1.0kb upstream 1874 true Chr4: 16852074-16853947 Arabidopsis thaliana
AT4G35480 1.0kb upstream 1.0kb upstream 1000 false Chr4: 16852948-16853947 Arabidopsis thaliana
AT4G35480 1.0kb downstream 1.0kb downstream 1874 true Chr4: 16851074-16852947 Arabidopsis thaliana
AT4G35480 1.0kb downstream 1.0kb downstream 1000 false Chr4: 16851074-16852073 Arabidopsis thaliana
AT4G35480 2.0kb upstream 2.0kb upstream 2874 true Chr4: 16852074-16854947 Arabidopsis thaliana
AT4G35480 2.0kb upstream 2.0kb upstream 2000 false Chr4: 16852948-16854947 Arabidopsis thaliana
AT4G35480 2.0kb downstream 2.0kb downstream 2874 true Chr4: 16850074-16852947 Arabidopsis thaliana
AT4G35480 2.0kb downstream 2.0kb downstream 2000 false Chr4: 16850074-16852073 Arabidopsis thaliana
AT4G35480 5.0kb upstream 5.0kb upstream 5874 true Chr4: 16852074-16857947 Arabidopsis thaliana
AT4G35480 5.0kb upstream 5.0kb upstream 5000 false Chr4: 16852948-16857947 Arabidopsis thaliana
AT4G35480 5.0kb downstream 5.0kb downstream 5874 true Chr4: 16847074-16852947 Arabidopsis thaliana
AT4G35480 5.0kb downstream 5.0kb downstream 5000 false Chr4: 16847074-16852073 Arabidopsis thaliana
AT4G35480 10.0kb upstream 10.0kb upstream 10874 true Chr4: 16852074-16862947 Arabidopsis thaliana
AT4G35480 10.0kb upstream 10.0kb upstream 10000 false Chr4: 16852948-16862947 Arabidopsis thaliana
AT4G35480 10.0kb downstream 10.0kb downstream 10874 true Chr4: 16842074-16852947 Arabidopsis thaliana
AT4G35480 10.0kb downstream 10.0kb downstream 10000 false Chr4: 16842074-16852073 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374963 5261 Brassicaceae View MSA
123800857 5264 Brassicales-Malvales View MSA
124298221 5266 SBM View MSA
124250738 5268 Malvidae View MSA
124070863 5270 Rosid View MSA
123753111 5271 Pentapetalae View MSA
122797850 5272 Eudicot View MSA
122051603 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121351603 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.478       Low
cufflinks 81.853     High  
cufflinks 11.162        
cufflinks 72.42     High  
cufflinks 9.306        
cufflinks 81.425     High  

0 Strain