Gene : AGF1 A. thaliana TAIR10
Primary Identifier:  ? AT4G35390 Defline:  (1 of 1) PTHR31100//PTHR31100:SF16 - FAMILY NOT NAMED // AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 25
Genomic Order:  3627 Name:  ? AT4G35390
Secondary Identifier:  ? PAC:19646431
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G35390 0.5kb upstream 0.5kb upstream 1867 true Chr4: 16828826-16830692 Arabidopsis thaliana
AT4G35390 0.5kb upstream 0.5kb upstream 500 false Chr4: 16828826-16829325 Arabidopsis thaliana
AT4G35390 0.5kb downstream 0.5kb downstream 1867 true Chr4: 16829326-16831192 Arabidopsis thaliana
AT4G35390 0.5kb downstream 0.5kb downstream 500 false Chr4: 16830693-16831192 Arabidopsis thaliana
AT4G35390 1.0kb upstream 1.0kb upstream 2367 true Chr4: 16828326-16830692 Arabidopsis thaliana
AT4G35390 1.0kb upstream 1.0kb upstream 1000 false Chr4: 16828326-16829325 Arabidopsis thaliana
AT4G35390 1.0kb downstream 1.0kb downstream 2367 true Chr4: 16829326-16831692 Arabidopsis thaliana
AT4G35390 1.0kb downstream 1.0kb downstream 1000 false Chr4: 16830693-16831692 Arabidopsis thaliana
AT4G35390 2.0kb upstream 2.0kb upstream 3367 true Chr4: 16827326-16830692 Arabidopsis thaliana
AT4G35390 2.0kb upstream 2.0kb upstream 2000 false Chr4: 16827326-16829325 Arabidopsis thaliana
AT4G35390 2.0kb downstream 2.0kb downstream 3367 true Chr4: 16829326-16832692 Arabidopsis thaliana
AT4G35390 2.0kb downstream 2.0kb downstream 2000 false Chr4: 16830693-16832692 Arabidopsis thaliana
AT4G35390 5.0kb upstream 5.0kb upstream 6367 true Chr4: 16824326-16830692 Arabidopsis thaliana
AT4G35390 5.0kb upstream 5.0kb upstream 5000 false Chr4: 16824326-16829325 Arabidopsis thaliana
AT4G35390 5.0kb downstream 5.0kb downstream 6367 true Chr4: 16829326-16835692 Arabidopsis thaliana
AT4G35390 5.0kb downstream 5.0kb downstream 5000 false Chr4: 16830693-16835692 Arabidopsis thaliana
AT4G35390 10.0kb upstream 10.0kb upstream 11367 true Chr4: 16819326-16830692 Arabidopsis thaliana
AT4G35390 10.0kb upstream 10.0kb upstream 10000 false Chr4: 16819326-16829325 Arabidopsis thaliana
AT4G35390 10.0kb downstream 10.0kb downstream 11367 true Chr4: 16829326-16840692 Arabidopsis thaliana
AT4G35390 10.0kb downstream 10.0kb downstream 10000 false Chr4: 16830693-16840692 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372963 5261 Brassicaceae View MSA
123835594 5264 Brassicales-Malvales View MSA
124343869 5266 SBM View MSA
124244739 5268 Malvidae View MSA
124072803 5270 Rosid View MSA
123751689 5271 Pentapetalae View MSA
122796160 5272 Eudicot View MSA
122048201 5273 Angiosperm View MSA
121348557 5274 Embryophyte View MSA
123380913 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.107     Low  
cufflinks 2.487        
cufflinks 0.099     Low  
cufflinks 4.082       High
cufflinks 0.052     Low Low
cufflinks 3.084        

0 Strain