Gene : CAT2 A. thaliana TAIR10
Primary Identifier:  ? AT4G35090 Defline:  (1 of 3) 1.11.1.21 - Catalase peroxidase
Genomic Order:  3595 Name:  ? AT4G35090
Secondary Identifier:  ? PAC:19644440
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana DETOX1-PWY Arabidopsis thaliana pathologic  
Athaliana DETOX1-PWY-1 Arabidopsis thaliana pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G35090 0.5kb upstream 0.5kb upstream 3484 true Chr4: 16700342-16703825 Arabidopsis thaliana
AT4G35090 0.5kb upstream 0.5kb upstream 500 false Chr4: 16703326-16703825 Arabidopsis thaliana
AT4G35090 0.5kb downstream 0.5kb downstream 3484 true Chr4: 16699842-16703325 Arabidopsis thaliana
AT4G35090 0.5kb downstream 0.5kb downstream 500 false Chr4: 16699842-16700341 Arabidopsis thaliana
AT4G35090 1.0kb upstream 1.0kb upstream 3984 true Chr4: 16700342-16704325 Arabidopsis thaliana
AT4G35090 1.0kb upstream 1.0kb upstream 1000 false Chr4: 16703326-16704325 Arabidopsis thaliana
AT4G35090 1.0kb downstream 1.0kb downstream 3984 true Chr4: 16699342-16703325 Arabidopsis thaliana
AT4G35090 1.0kb downstream 1.0kb downstream 1000 false Chr4: 16699342-16700341 Arabidopsis thaliana
AT4G35090 2.0kb upstream 2.0kb upstream 4984 true Chr4: 16700342-16705325 Arabidopsis thaliana
AT4G35090 2.0kb upstream 2.0kb upstream 2000 false Chr4: 16703326-16705325 Arabidopsis thaliana
AT4G35090 2.0kb downstream 2.0kb downstream 4984 true Chr4: 16698342-16703325 Arabidopsis thaliana
AT4G35090 2.0kb downstream 2.0kb downstream 2000 false Chr4: 16698342-16700341 Arabidopsis thaliana
AT4G35090 5.0kb upstream 5.0kb upstream 7984 true Chr4: 16700342-16708325 Arabidopsis thaliana
AT4G35090 5.0kb upstream 5.0kb upstream 5000 false Chr4: 16703326-16708325 Arabidopsis thaliana
AT4G35090 5.0kb downstream 5.0kb downstream 7984 true Chr4: 16695342-16703325 Arabidopsis thaliana
AT4G35090 5.0kb downstream 5.0kb downstream 5000 false Chr4: 16695342-16700341 Arabidopsis thaliana
AT4G35090 10.0kb upstream 10.0kb upstream 12984 true Chr4: 16700342-16713325 Arabidopsis thaliana
AT4G35090 10.0kb upstream 10.0kb upstream 10000 false Chr4: 16703326-16713325 Arabidopsis thaliana
AT4G35090 10.0kb downstream 10.0kb downstream 12984 true Chr4: 16690342-16703325 Arabidopsis thaliana
AT4G35090 10.0kb downstream 10.0kb downstream 10000 false Chr4: 16690342-16700341 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040958 5273 Angiosperm View MSA
122367611 5261 Brassicaceae View MSA
123837299 5264 Brassicales-Malvales View MSA
124338278 5266 SBM View MSA
124254242 5268 Malvidae View MSA
124061092 5270 Rosid View MSA
123744547 5271 Pentapetalae View MSA
122789351 5272 Eudicot View MSA
121344781 5274 Embryophyte View MSA
123424047 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.088        
cufflinks 4.924       Low
cufflinks 38.847     High  
cufflinks 9.568        
cufflinks 49.078     High High
cufflinks 9.083        

0 Strain