Gene : XDH2 A. thaliana TAIR10
Primary Identifier:  ? AT4G34900 Defline:  (1 of 2) K00106 - xanthine dehydrogenase/oxidase (XDH)
Genomic Order:  3575 Name:  ? AT4G34900
Secondary Identifier:  ? PAC:19645925
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5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-5695 Arabidopsis thaliana pathologic  
Athaliana PWY-6596 Arabidopsis thaliana pathologic  
Athaliana PWY-6606 Arabidopsis thaliana pathologic  
Athaliana PWY-6608 Arabidopsis thaliana pathologic  
Athaliana SALVADEHYPOX-PWY Arabidopsis thaliana pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G34900 0.5kb upstream 0.5kb upstream 6273 true Chr4: 16625555-16631827 Arabidopsis thaliana
AT4G34900 0.5kb upstream 0.5kb upstream 500 false Chr4: 16631328-16631827 Arabidopsis thaliana
AT4G34900 0.5kb downstream 0.5kb downstream 6273 true Chr4: 16625055-16631327 Arabidopsis thaliana
AT4G34900 0.5kb downstream 0.5kb downstream 500 false Chr4: 16625055-16625554 Arabidopsis thaliana
AT4G34900 1.0kb upstream 1.0kb upstream 6773 true Chr4: 16625555-16632327 Arabidopsis thaliana
AT4G34900 1.0kb upstream 1.0kb upstream 1000 false Chr4: 16631328-16632327 Arabidopsis thaliana
AT4G34900 1.0kb downstream 1.0kb downstream 6773 true Chr4: 16624555-16631327 Arabidopsis thaliana
AT4G34900 1.0kb downstream 1.0kb downstream 1000 false Chr4: 16624555-16625554 Arabidopsis thaliana
AT4G34900 2.0kb upstream 2.0kb upstream 7773 true Chr4: 16625555-16633327 Arabidopsis thaliana
AT4G34900 2.0kb upstream 2.0kb upstream 2000 false Chr4: 16631328-16633327 Arabidopsis thaliana
AT4G34900 2.0kb downstream 2.0kb downstream 7773 true Chr4: 16623555-16631327 Arabidopsis thaliana
AT4G34900 2.0kb downstream 2.0kb downstream 2000 false Chr4: 16623555-16625554 Arabidopsis thaliana
AT4G34900 5.0kb upstream 5.0kb upstream 10773 true Chr4: 16625555-16636327 Arabidopsis thaliana
AT4G34900 5.0kb upstream 5.0kb upstream 5000 false Chr4: 16631328-16636327 Arabidopsis thaliana
AT4G34900 5.0kb downstream 5.0kb downstream 10773 true Chr4: 16620555-16631327 Arabidopsis thaliana
AT4G34900 5.0kb downstream 5.0kb downstream 5000 false Chr4: 16620555-16625554 Arabidopsis thaliana
AT4G34900 10.0kb upstream 10.0kb upstream 15773 true Chr4: 16625555-16641327 Arabidopsis thaliana
AT4G34900 10.0kb upstream 10.0kb upstream 10000 false Chr4: 16631328-16641327 Arabidopsis thaliana
AT4G34900 10.0kb downstream 10.0kb downstream 15773 true Chr4: 16615555-16631327 Arabidopsis thaliana
AT4G34900 10.0kb downstream 10.0kb downstream 10000 false Chr4: 16615555-16625554 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121494763 5273 Angiosperm Singleton cluster - no MSA
122330546 5261 Brassicaceae Singleton cluster - no MSA
123771782 5264 Brassicales-Malvales Singleton cluster - no MSA
124270307 5266 SBM Singleton cluster - no MSA
124126391 5268 Malvidae Singleton cluster - no MSA
123855306 5270 Rosid Singleton cluster - no MSA
123441293 5271 Pentapetalae Singleton cluster - no MSA
122476878 5272 Eudicot Singleton cluster - no MSA
120768131 5274 Embryophyte Singleton cluster - no MSA
122810521 5275 Viridiplantae Singleton cluster - no MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.258        
cufflinks 7.293        
cufflinks 4.188        
cufflinks 4.172        
cufflinks 2.646       Low
cufflinks 9.195       High

0 Strain