Sequence Feature Displayer
Ontology Annotation Displayer
7 Pathways
Pathway Identifier | Organism Name | Analysis Method | Analysis Status |
---|---|---|---|
Athaliana PWY-5080 | Arabidopsis thaliana | pathologic | |
Athaliana PWY-6433 | Arabidopsis thaliana | pathologic | |
Athaliana PWY-6598 | Arabidopsis thaliana | pathologic | |
Athaliana PWY-7036 | Arabidopsis thaliana | pathologic | |
Athaliana PWY-7601 | Arabidopsis thaliana | pathologic | |
Athaliana PWY-7606 | Arabidopsis thaliana | pathologic | |
Athaliana PWY-7619 | Arabidopsis thaliana | pathologic |
Other
20 Flanking Regions
Region Name | Flank Size | Direction | Length | Gene Included? | Chromosome Location | Organism Name |
---|---|---|---|---|---|---|
AT4G34520 0.5kb upstream | 0.5kb | upstream | 2138 | true | Chr4: 16493705-16495842 | Arabidopsis thaliana |
AT4G34520 0.5kb upstream | 0.5kb | upstream | 500 | false | Chr4: 16493705-16494204 | Arabidopsis thaliana |
AT4G34520 0.5kb downstream | 0.5kb | downstream | 2138 | true | Chr4: 16494205-16496342 | Arabidopsis thaliana |
AT4G34520 0.5kb downstream | 0.5kb | downstream | 500 | false | Chr4: 16495843-16496342 | Arabidopsis thaliana |
AT4G34520 1.0kb upstream | 1.0kb | upstream | 2638 | true | Chr4: 16493205-16495842 | Arabidopsis thaliana |
AT4G34520 1.0kb upstream | 1.0kb | upstream | 1000 | false | Chr4: 16493205-16494204 | Arabidopsis thaliana |
AT4G34520 1.0kb downstream | 1.0kb | downstream | 2638 | true | Chr4: 16494205-16496842 | Arabidopsis thaliana |
AT4G34520 1.0kb downstream | 1.0kb | downstream | 1000 | false | Chr4: 16495843-16496842 | Arabidopsis thaliana |
AT4G34520 2.0kb upstream | 2.0kb | upstream | 3638 | true | Chr4: 16492205-16495842 | Arabidopsis thaliana |
AT4G34520 2.0kb upstream | 2.0kb | upstream | 2000 | false | Chr4: 16492205-16494204 | Arabidopsis thaliana |
AT4G34520 2.0kb downstream | 2.0kb | downstream | 3638 | true | Chr4: 16494205-16497842 | Arabidopsis thaliana |
AT4G34520 2.0kb downstream | 2.0kb | downstream | 2000 | false | Chr4: 16495843-16497842 | Arabidopsis thaliana |
AT4G34520 5.0kb upstream | 5.0kb | upstream | 6638 | true | Chr4: 16489205-16495842 | Arabidopsis thaliana |
AT4G34520 5.0kb upstream | 5.0kb | upstream | 5000 | false | Chr4: 16489205-16494204 | Arabidopsis thaliana |
AT4G34520 5.0kb downstream | 5.0kb | downstream | 6638 | true | Chr4: 16494205-16500842 | Arabidopsis thaliana |
AT4G34520 5.0kb downstream | 5.0kb | downstream | 5000 | false | Chr4: 16495843-16500842 | Arabidopsis thaliana |
AT4G34520 10.0kb upstream | 10.0kb | upstream | 11638 | true | Chr4: 16484205-16495842 | Arabidopsis thaliana |
AT4G34520 10.0kb upstream | 10.0kb | upstream | 10000 | false | Chr4: 16484205-16494204 | Arabidopsis thaliana |
AT4G34520 10.0kb downstream | 10.0kb | downstream | 11638 | true | Chr4: 16494205-16505842 | Arabidopsis thaliana |
AT4G34520 10.0kb downstream | 10.0kb | downstream | 10000 | false | Chr4: 16495843-16505842 | Arabidopsis thaliana |
10 Protein Familys
Cluster ID | Method ID | Method Name | Sequence Alignment |
---|---|---|---|
121510474 | 5273 | Angiosperm | View MSA |
122364394 | 5261 | Brassicaceae | View MSA |
123798749 | 5264 | Brassicales-Malvales | View MSA |
124296345 | 5266 | SBM | View MSA |
124148520 | 5268 | Malvidae | View MSA |
123874498 | 5270 | Rosid | View MSA |
123458460 | 5271 | Pentapetalae | View MSA |
122493865 | 5272 | Eudicot | View MSA |
120783572 | 5274 | Embryophyte | View MSA |
122825569 | 5275 | Viridiplantae | View MSA |
6 Rna Seq Expressionss
Analysis Method | Abundance | Low Confidence Limit | High Confidence Limit | Relative Library Expression | Relative Locus Expression |
---|---|---|---|---|---|
cufflinks | 0.0 | Not Expressed | Not Expressed | ||
cufflinks | 0.0 | Not Expressed | Not Expressed | ||
cufflinks | 0.0 | Not Expressed | Not Expressed | ||
cufflinks | 0.0 | Not Expressed | Not Expressed | ||
cufflinks | 0.017 | Low | |||
cufflinks | 0.0 | Not Expressed | Not Expressed |