Gene : AT4G34412 A. thaliana TAIR10
Defline:  (1 of 1) PTHR15840 - CGI-121 FAMILY MEMBER Genomic Order:  3523
Name:  ? AT4G34412 Secondary Identifier:  ? PAC:19645147
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G34412 0.5kb upstream 0.5kb upstream 2174 true Chr4: 16452960-16455133 Arabidopsis thaliana
AT4G34412 0.5kb upstream 0.5kb upstream 500 false Chr4: 16454634-16455133 Arabidopsis thaliana
AT4G34412 0.5kb downstream 0.5kb downstream 2174 true Chr4: 16452460-16454633 Arabidopsis thaliana
AT4G34412 0.5kb downstream 0.5kb downstream 500 false Chr4: 16452460-16452959 Arabidopsis thaliana
AT4G34412 1.0kb upstream 1.0kb upstream 2674 true Chr4: 16452960-16455633 Arabidopsis thaliana
AT4G34412 1.0kb upstream 1.0kb upstream 1000 false Chr4: 16454634-16455633 Arabidopsis thaliana
AT4G34412 1.0kb downstream 1.0kb downstream 2674 true Chr4: 16451960-16454633 Arabidopsis thaliana
AT4G34412 1.0kb downstream 1.0kb downstream 1000 false Chr4: 16451960-16452959 Arabidopsis thaliana
AT4G34412 2.0kb upstream 2.0kb upstream 3674 true Chr4: 16452960-16456633 Arabidopsis thaliana
AT4G34412 2.0kb upstream 2.0kb upstream 2000 false Chr4: 16454634-16456633 Arabidopsis thaliana
AT4G34412 2.0kb downstream 2.0kb downstream 3674 true Chr4: 16450960-16454633 Arabidopsis thaliana
AT4G34412 2.0kb downstream 2.0kb downstream 2000 false Chr4: 16450960-16452959 Arabidopsis thaliana
AT4G34412 5.0kb upstream 5.0kb upstream 6674 true Chr4: 16452960-16459633 Arabidopsis thaliana
AT4G34412 5.0kb upstream 5.0kb upstream 5000 false Chr4: 16454634-16459633 Arabidopsis thaliana
AT4G34412 5.0kb downstream 5.0kb downstream 6674 true Chr4: 16447960-16454633 Arabidopsis thaliana
AT4G34412 5.0kb downstream 5.0kb downstream 5000 false Chr4: 16447960-16452959 Arabidopsis thaliana
AT4G34412 10.0kb upstream 10.0kb upstream 11674 true Chr4: 16452960-16464633 Arabidopsis thaliana
AT4G34412 10.0kb upstream 10.0kb upstream 10000 false Chr4: 16454634-16464633 Arabidopsis thaliana
AT4G34412 10.0kb downstream 10.0kb downstream 11674 true Chr4: 16442960-16454633 Arabidopsis thaliana
AT4G34412 10.0kb downstream 10.0kb downstream 10000 false Chr4: 16442960-16452959 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026161 5273 Angiosperm View MSA
122361553 5261 Brassicaceae View MSA
123832745 5264 Brassicales-Malvales View MSA
124340000 5266 SBM View MSA
124244243 5268 Malvidae View MSA
124060531 5270 Rosid View MSA
123741056 5271 Pentapetalae View MSA
122787559 5272 Eudicot View MSA
121345637 5274 Embryophyte View MSA
123425208 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.557        
cufflinks 8.218       High
cufflinks 4.919       Low
cufflinks 8.16       High
cufflinks 5.153        
cufflinks 7.195        

0 Strain