Gene : AT4G34400 A. thaliana TAIR10
Defline:  (1 of 92) PF02362 - B3 DNA binding domain (B3) Genomic Order:  3521
Name:  ? AT4G34400 Secondary Identifier:  ? PAC:19647088
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G34400 0.5kb upstream 0.5kb upstream 3066 true Chr4: 16444708-16447773 Arabidopsis thaliana
AT4G34400 0.5kb upstream 0.5kb upstream 500 false Chr4: 16444708-16445207 Arabidopsis thaliana
AT4G34400 0.5kb downstream 0.5kb downstream 3066 true Chr4: 16445208-16448273 Arabidopsis thaliana
AT4G34400 0.5kb downstream 0.5kb downstream 500 false Chr4: 16447774-16448273 Arabidopsis thaliana
AT4G34400 1.0kb upstream 1.0kb upstream 3566 true Chr4: 16444208-16447773 Arabidopsis thaliana
AT4G34400 1.0kb upstream 1.0kb upstream 1000 false Chr4: 16444208-16445207 Arabidopsis thaliana
AT4G34400 1.0kb downstream 1.0kb downstream 3566 true Chr4: 16445208-16448773 Arabidopsis thaliana
AT4G34400 1.0kb downstream 1.0kb downstream 1000 false Chr4: 16447774-16448773 Arabidopsis thaliana
AT4G34400 2.0kb upstream 2.0kb upstream 4566 true Chr4: 16443208-16447773 Arabidopsis thaliana
AT4G34400 2.0kb upstream 2.0kb upstream 2000 false Chr4: 16443208-16445207 Arabidopsis thaliana
AT4G34400 2.0kb downstream 2.0kb downstream 4566 true Chr4: 16445208-16449773 Arabidopsis thaliana
AT4G34400 2.0kb downstream 2.0kb downstream 2000 false Chr4: 16447774-16449773 Arabidopsis thaliana
AT4G34400 5.0kb upstream 5.0kb upstream 7566 true Chr4: 16440208-16447773 Arabidopsis thaliana
AT4G34400 5.0kb upstream 5.0kb upstream 5000 false Chr4: 16440208-16445207 Arabidopsis thaliana
AT4G34400 5.0kb downstream 5.0kb downstream 7566 true Chr4: 16445208-16452773 Arabidopsis thaliana
AT4G34400 5.0kb downstream 5.0kb downstream 5000 false Chr4: 16447774-16452773 Arabidopsis thaliana
AT4G34400 10.0kb upstream 10.0kb upstream 12566 true Chr4: 16435208-16447773 Arabidopsis thaliana
AT4G34400 10.0kb upstream 10.0kb upstream 10000 false Chr4: 16435208-16445207 Arabidopsis thaliana
AT4G34400 10.0kb downstream 10.0kb downstream 12566 true Chr4: 16445208-16457773 Arabidopsis thaliana
AT4G34400 10.0kb downstream 10.0kb downstream 10000 false Chr4: 16447774-16457773 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365089 5261 Brassicaceae View MSA
123841121 5264 Brassicales-Malvales View MSA
124350666 5266 SBM View MSA
124254086 5268 Malvidae View MSA
124073823 5270 Rosid View MSA
123753418 5271 Pentapetalae View MSA
122797829 5272 Eudicot View MSA
122050133 5273 Angiosperm View MSA
121350826 5274 Embryophyte View MSA
123427153 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.011        
cufflinks 1.034        
cufflinks 0.762        
cufflinks 1.106       High
cufflinks 0.854        
cufflinks 0.712       Low

0 Strain