Gene : AT4G34310 A. thaliana TAIR10
Defline:  (1 of 2) PTHR22731 - RIBONUCLEASES P/MRP PROTEIN SUBUNIT POP1 Genomic Order:  3512
Name:  ? AT4G34310 Secondary Identifier:  ? PAC:19648057
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G34310 0.5kb upstream 0.5kb upstream 6123 true Chr4: 16413613-16419735 Arabidopsis thaliana
AT4G34310 0.5kb upstream 0.5kb upstream 500 false Chr4: 16413613-16414112 Arabidopsis thaliana
AT4G34310 0.5kb downstream 0.5kb downstream 6123 true Chr4: 16414113-16420235 Arabidopsis thaliana
AT4G34310 0.5kb downstream 0.5kb downstream 500 false Chr4: 16419736-16420235 Arabidopsis thaliana
AT4G34310 1.0kb upstream 1.0kb upstream 6623 true Chr4: 16413113-16419735 Arabidopsis thaliana
AT4G34310 1.0kb upstream 1.0kb upstream 1000 false Chr4: 16413113-16414112 Arabidopsis thaliana
AT4G34310 1.0kb downstream 1.0kb downstream 6623 true Chr4: 16414113-16420735 Arabidopsis thaliana
AT4G34310 1.0kb downstream 1.0kb downstream 1000 false Chr4: 16419736-16420735 Arabidopsis thaliana
AT4G34310 2.0kb upstream 2.0kb upstream 7623 true Chr4: 16412113-16419735 Arabidopsis thaliana
AT4G34310 2.0kb upstream 2.0kb upstream 2000 false Chr4: 16412113-16414112 Arabidopsis thaliana
AT4G34310 2.0kb downstream 2.0kb downstream 7623 true Chr4: 16414113-16421735 Arabidopsis thaliana
AT4G34310 2.0kb downstream 2.0kb downstream 2000 false Chr4: 16419736-16421735 Arabidopsis thaliana
AT4G34310 5.0kb upstream 5.0kb upstream 10623 true Chr4: 16409113-16419735 Arabidopsis thaliana
AT4G34310 5.0kb upstream 5.0kb upstream 5000 false Chr4: 16409113-16414112 Arabidopsis thaliana
AT4G34310 5.0kb downstream 5.0kb downstream 10623 true Chr4: 16414113-16424735 Arabidopsis thaliana
AT4G34310 5.0kb downstream 5.0kb downstream 5000 false Chr4: 16419736-16424735 Arabidopsis thaliana
AT4G34310 10.0kb upstream 10.0kb upstream 15623 true Chr4: 16404113-16419735 Arabidopsis thaliana
AT4G34310 10.0kb upstream 10.0kb upstream 10000 false Chr4: 16404113-16414112 Arabidopsis thaliana
AT4G34310 10.0kb downstream 10.0kb downstream 15623 true Chr4: 16414113-16429735 Arabidopsis thaliana
AT4G34310 10.0kb downstream 10.0kb downstream 10000 false Chr4: 16419736-16429735 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360851 5261 Brassicaceae View MSA
123829850 5264 Brassicales-Malvales View MSA
124341179 5266 SBM View MSA
124253574 5268 Malvidae View MSA
124068108 5270 Rosid View MSA
123736662 5271 Pentapetalae View MSA
122791519 5272 Eudicot View MSA
122046826 5273 Angiosperm View MSA
121343799 5274 Embryophyte View MSA
123427789 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.038        
cufflinks 2.092        
cufflinks 1.903       Low
cufflinks 2.324       High
cufflinks 2.197        
cufflinks 2.009        

0 Strain