Gene : AT4G37180 A. thaliana TAIR10
Defline:  (1 of 240) PF00249 - Myb-like DNA-binding domain (Myb_DNA-binding) Genomic Order:  3818
Name:  ? AT4G37180 Secondary Identifier:  ? PAC:19643834
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G37180 0.5kb upstream 0.5kb upstream 2304 true Chr4: 17504064-17506367 Arabidopsis thaliana
AT4G37180 0.5kb upstream 0.5kb upstream 500 false Chr4: 17504064-17504563 Arabidopsis thaliana
AT4G37180 0.5kb downstream 0.5kb downstream 2304 true Chr4: 17504564-17506867 Arabidopsis thaliana
AT4G37180 0.5kb downstream 0.5kb downstream 500 false Chr4: 17506368-17506867 Arabidopsis thaliana
AT4G37180 1.0kb upstream 1.0kb upstream 2804 true Chr4: 17503564-17506367 Arabidopsis thaliana
AT4G37180 1.0kb upstream 1.0kb upstream 1000 false Chr4: 17503564-17504563 Arabidopsis thaliana
AT4G37180 1.0kb downstream 1.0kb downstream 2804 true Chr4: 17504564-17507367 Arabidopsis thaliana
AT4G37180 1.0kb downstream 1.0kb downstream 1000 false Chr4: 17506368-17507367 Arabidopsis thaliana
AT4G37180 2.0kb upstream 2.0kb upstream 3804 true Chr4: 17502564-17506367 Arabidopsis thaliana
AT4G37180 2.0kb upstream 2.0kb upstream 2000 false Chr4: 17502564-17504563 Arabidopsis thaliana
AT4G37180 2.0kb downstream 2.0kb downstream 3804 true Chr4: 17504564-17508367 Arabidopsis thaliana
AT4G37180 2.0kb downstream 2.0kb downstream 2000 false Chr4: 17506368-17508367 Arabidopsis thaliana
AT4G37180 5.0kb upstream 5.0kb upstream 6804 true Chr4: 17499564-17506367 Arabidopsis thaliana
AT4G37180 5.0kb upstream 5.0kb upstream 5000 false Chr4: 17499564-17504563 Arabidopsis thaliana
AT4G37180 5.0kb downstream 5.0kb downstream 6804 true Chr4: 17504564-17511367 Arabidopsis thaliana
AT4G37180 5.0kb downstream 5.0kb downstream 5000 false Chr4: 17506368-17511367 Arabidopsis thaliana
AT4G37180 10.0kb upstream 10.0kb upstream 11804 true Chr4: 17494564-17506367 Arabidopsis thaliana
AT4G37180 10.0kb upstream 10.0kb upstream 10000 false Chr4: 17494564-17504563 Arabidopsis thaliana
AT4G37180 10.0kb downstream 10.0kb downstream 11804 true Chr4: 17504564-17516367 Arabidopsis thaliana
AT4G37180 10.0kb downstream 10.0kb downstream 10000 false Chr4: 17506368-17516367 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380963 5261 Brassicaceae View MSA
123828333 5264 Brassicales-Malvales View MSA
124321526 5266 SBM View MSA
124242814 5268 Malvidae View MSA
124066907 5270 Rosid View MSA
123742212 5271 Pentapetalae View MSA
122792121 5272 Eudicot View MSA
122049766 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121350891 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.543       Low
cufflinks 33.642     High High
cufflinks 17.53        
cufflinks 29.007        
cufflinks 21.836        
cufflinks 14.387        

0 Strain