Gene : HB40 A. thaliana TAIR10
Primary Identifier:  ? AT4G36740 Defline:  (1 of 3) PTHR24326:SF281 - HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-21-RELATED
Genomic Order:  3768 Name:  ? AT4G36740
Secondary Identifier:  ? PAC:19647527
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0 Pathways

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G36740 0.5kb upstream 0.5kb upstream 2316 true Chr4: 17314559-17316874 Arabidopsis thaliana
AT4G36740 0.5kb upstream 0.5kb upstream 500 false Chr4: 17316375-17316874 Arabidopsis thaliana
AT4G36740 0.5kb downstream 0.5kb downstream 2316 true Chr4: 17314059-17316374 Arabidopsis thaliana
AT4G36740 0.5kb downstream 0.5kb downstream 500 false Chr4: 17314059-17314558 Arabidopsis thaliana
AT4G36740 1.0kb upstream 1.0kb upstream 2816 true Chr4: 17314559-17317374 Arabidopsis thaliana
AT4G36740 1.0kb upstream 1.0kb upstream 1000 false Chr4: 17316375-17317374 Arabidopsis thaliana
AT4G36740 1.0kb downstream 1.0kb downstream 2816 true Chr4: 17313559-17316374 Arabidopsis thaliana
AT4G36740 1.0kb downstream 1.0kb downstream 1000 false Chr4: 17313559-17314558 Arabidopsis thaliana
AT4G36740 2.0kb upstream 2.0kb upstream 3816 true Chr4: 17314559-17318374 Arabidopsis thaliana
AT4G36740 2.0kb upstream 2.0kb upstream 2000 false Chr4: 17316375-17318374 Arabidopsis thaliana
AT4G36740 2.0kb downstream 2.0kb downstream 3816 true Chr4: 17312559-17316374 Arabidopsis thaliana
AT4G36740 2.0kb downstream 2.0kb downstream 2000 false Chr4: 17312559-17314558 Arabidopsis thaliana
AT4G36740 5.0kb upstream 5.0kb upstream 6816 true Chr4: 17314559-17321374 Arabidopsis thaliana
AT4G36740 5.0kb upstream 5.0kb upstream 5000 false Chr4: 17316375-17321374 Arabidopsis thaliana
AT4G36740 5.0kb downstream 5.0kb downstream 6816 true Chr4: 17309559-17316374 Arabidopsis thaliana
AT4G36740 5.0kb downstream 5.0kb downstream 5000 false Chr4: 17309559-17314558 Arabidopsis thaliana
AT4G36740 10.0kb upstream 10.0kb upstream 11816 true Chr4: 17314559-17326374 Arabidopsis thaliana
AT4G36740 10.0kb upstream 10.0kb upstream 10000 false Chr4: 17316375-17326374 Arabidopsis thaliana
AT4G36740 10.0kb downstream 10.0kb downstream 11816 true Chr4: 17304559-17316374 Arabidopsis thaliana
AT4G36740 10.0kb downstream 10.0kb downstream 10000 false Chr4: 17304559-17314558 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368682 5261 Brassicaceae View MSA
123836395 5264 Brassicales-Malvales View MSA
124345249 5266 SBM View MSA
124253261 5268 Malvidae View MSA
124061300 5270 Rosid View MSA
123736680 5271 Pentapetalae View MSA
122796133 5272 Eudicot View MSA
122042679 5273 Angiosperm View MSA
121309999 5274 Embryophyte View MSA
123347608 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.024     Low  
cufflinks 0.8        
cufflinks 0.017     Low Low
cufflinks 2.799       High
cufflinks 0.039     Low  
cufflinks 2.182        

0 Strain