Gene : PBRP A. thaliana TAIR10
Primary Identifier:  ? AT4G36650 Defline:  (1 of 1) PTHR11618//PTHR11618:SF26 - TRANSCRIPTION INITIATION FACTOR IIB-RELATED // SUBFAMILY NOT NAMED
Genomic Order:  3759 Name:  ? AT4G36650
Secondary Identifier:  ? PAC:19645507
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G36650 0.5kb upstream 0.5kb upstream 2968 true Chr4: 17283132-17286099 Arabidopsis thaliana
AT4G36650 0.5kb upstream 0.5kb upstream 500 false Chr4: 17285600-17286099 Arabidopsis thaliana
AT4G36650 0.5kb downstream 0.5kb downstream 2968 true Chr4: 17282632-17285599 Arabidopsis thaliana
AT4G36650 0.5kb downstream 0.5kb downstream 500 false Chr4: 17282632-17283131 Arabidopsis thaliana
AT4G36650 1.0kb upstream 1.0kb upstream 3468 true Chr4: 17283132-17286599 Arabidopsis thaliana
AT4G36650 1.0kb upstream 1.0kb upstream 1000 false Chr4: 17285600-17286599 Arabidopsis thaliana
AT4G36650 1.0kb downstream 1.0kb downstream 3468 true Chr4: 17282132-17285599 Arabidopsis thaliana
AT4G36650 1.0kb downstream 1.0kb downstream 1000 false Chr4: 17282132-17283131 Arabidopsis thaliana
AT4G36650 2.0kb upstream 2.0kb upstream 4468 true Chr4: 17283132-17287599 Arabidopsis thaliana
AT4G36650 2.0kb upstream 2.0kb upstream 2000 false Chr4: 17285600-17287599 Arabidopsis thaliana
AT4G36650 2.0kb downstream 2.0kb downstream 4468 true Chr4: 17281132-17285599 Arabidopsis thaliana
AT4G36650 2.0kb downstream 2.0kb downstream 2000 false Chr4: 17281132-17283131 Arabidopsis thaliana
AT4G36650 5.0kb upstream 5.0kb upstream 7468 true Chr4: 17283132-17290599 Arabidopsis thaliana
AT4G36650 5.0kb upstream 5.0kb upstream 5000 false Chr4: 17285600-17290599 Arabidopsis thaliana
AT4G36650 5.0kb downstream 5.0kb downstream 7468 true Chr4: 17278132-17285599 Arabidopsis thaliana
AT4G36650 5.0kb downstream 5.0kb downstream 5000 false Chr4: 17278132-17283131 Arabidopsis thaliana
AT4G36650 10.0kb upstream 10.0kb upstream 12468 true Chr4: 17283132-17295599 Arabidopsis thaliana
AT4G36650 10.0kb upstream 10.0kb upstream 10000 false Chr4: 17285600-17295599 Arabidopsis thaliana
AT4G36650 10.0kb downstream 10.0kb downstream 12468 true Chr4: 17273132-17285599 Arabidopsis thaliana
AT4G36650 10.0kb downstream 10.0kb downstream 10000 false Chr4: 17273132-17283131 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361652 5261 Brassicaceae View MSA
123833591 5264 Brassicales-Malvales View MSA
124341458 5266 SBM View MSA
124241897 5268 Malvidae View MSA
124063096 5270 Rosid View MSA
123741004 5271 Pentapetalae View MSA
122785820 5272 Eudicot View MSA
122046591 5273 Angiosperm View MSA
121310628 5274 Embryophyte View MSA
123348063 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.065        
cufflinks 6.426       High
cufflinks 1.784       Low
cufflinks 5.234        
cufflinks 2.018        
cufflinks 5.885        

0 Strain