Gene : AT4G36600 A. thaliana TAIR10
Defline:  (1 of 2) PTHR23241//PTHR23241:SF54 - LATE EMBRYOGENESIS ABUNDANT PLANTS LEA-RELATED // LATE EMBRYOGENESIS ABUNDANT (LEA) PROTEIN-RELATED Genomic Order:  3754
Name:  ? AT4G36600 Secondary Identifier:  ? PAC:19644189
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G36600 0.5kb upstream 0.5kb upstream 1935 true Chr4: 17263166-17265100 Arabidopsis thaliana
AT4G36600 0.5kb upstream 0.5kb upstream 500 false Chr4: 17263166-17263665 Arabidopsis thaliana
AT4G36600 0.5kb downstream 0.5kb downstream 1935 true Chr4: 17263666-17265600 Arabidopsis thaliana
AT4G36600 0.5kb downstream 0.5kb downstream 500 false Chr4: 17265101-17265600 Arabidopsis thaliana
AT4G36600 1.0kb upstream 1.0kb upstream 2435 true Chr4: 17262666-17265100 Arabidopsis thaliana
AT4G36600 1.0kb upstream 1.0kb upstream 1000 false Chr4: 17262666-17263665 Arabidopsis thaliana
AT4G36600 1.0kb downstream 1.0kb downstream 2435 true Chr4: 17263666-17266100 Arabidopsis thaliana
AT4G36600 1.0kb downstream 1.0kb downstream 1000 false Chr4: 17265101-17266100 Arabidopsis thaliana
AT4G36600 2.0kb upstream 2.0kb upstream 3435 true Chr4: 17261666-17265100 Arabidopsis thaliana
AT4G36600 2.0kb upstream 2.0kb upstream 2000 false Chr4: 17261666-17263665 Arabidopsis thaliana
AT4G36600 2.0kb downstream 2.0kb downstream 3435 true Chr4: 17263666-17267100 Arabidopsis thaliana
AT4G36600 2.0kb downstream 2.0kb downstream 2000 false Chr4: 17265101-17267100 Arabidopsis thaliana
AT4G36600 5.0kb upstream 5.0kb upstream 6435 true Chr4: 17258666-17265100 Arabidopsis thaliana
AT4G36600 5.0kb upstream 5.0kb upstream 5000 false Chr4: 17258666-17263665 Arabidopsis thaliana
AT4G36600 5.0kb downstream 5.0kb downstream 6435 true Chr4: 17263666-17270100 Arabidopsis thaliana
AT4G36600 5.0kb downstream 5.0kb downstream 5000 false Chr4: 17265101-17270100 Arabidopsis thaliana
AT4G36600 10.0kb upstream 10.0kb upstream 11435 true Chr4: 17253666-17265100 Arabidopsis thaliana
AT4G36600 10.0kb upstream 10.0kb upstream 10000 false Chr4: 17253666-17263665 Arabidopsis thaliana
AT4G36600 10.0kb downstream 10.0kb downstream 11435 true Chr4: 17263666-17275100 Arabidopsis thaliana
AT4G36600 10.0kb downstream 10.0kb downstream 10000 false Chr4: 17265101-17275100 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375996 5261 Brassicaceae View MSA
123828221 5264 Brassicales-Malvales View MSA
124321516 5266 SBM View MSA
124248034 5268 Malvidae View MSA
124071734 5270 Rosid View MSA
123743630 5271 Pentapetalae View MSA
122796443 5272 Eudicot View MSA
122050999 5273 Angiosperm View MSA
121350297 5274 Embryophyte View MSA
123428296 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.083     Low  
cufflinks 0.168     Low  
cufflinks 0.026     Low Low
cufflinks 0.511       High
cufflinks 0.03     Low Low
cufflinks 0.163     Low  

0 Strain