Gene : EMB2754 A. thaliana TAIR10
Primary Identifier:  ? AT4G36630 Defline:  (1 of 1) PTHR12894//PTHR12894:SF10 - CNH DOMAIN CONTAINING // VAM6/VPS39-LIKE PROTEIN
Genomic Order:  3757 Name:  ? AT4G36630
Secondary Identifier:  ? PAC:19646008
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G36630 0.5kb upstream 0.5kb upstream 5298 true Chr4: 17271819-17277116 Arabidopsis thaliana
AT4G36630 0.5kb upstream 0.5kb upstream 500 false Chr4: 17276617-17277116 Arabidopsis thaliana
AT4G36630 0.5kb downstream 0.5kb downstream 5298 true Chr4: 17271319-17276616 Arabidopsis thaliana
AT4G36630 0.5kb downstream 0.5kb downstream 500 false Chr4: 17271319-17271818 Arabidopsis thaliana
AT4G36630 1.0kb upstream 1.0kb upstream 5798 true Chr4: 17271819-17277616 Arabidopsis thaliana
AT4G36630 1.0kb upstream 1.0kb upstream 1000 false Chr4: 17276617-17277616 Arabidopsis thaliana
AT4G36630 1.0kb downstream 1.0kb downstream 5798 true Chr4: 17270819-17276616 Arabidopsis thaliana
AT4G36630 1.0kb downstream 1.0kb downstream 1000 false Chr4: 17270819-17271818 Arabidopsis thaliana
AT4G36630 2.0kb upstream 2.0kb upstream 6798 true Chr4: 17271819-17278616 Arabidopsis thaliana
AT4G36630 2.0kb upstream 2.0kb upstream 2000 false Chr4: 17276617-17278616 Arabidopsis thaliana
AT4G36630 2.0kb downstream 2.0kb downstream 6798 true Chr4: 17269819-17276616 Arabidopsis thaliana
AT4G36630 2.0kb downstream 2.0kb downstream 2000 false Chr4: 17269819-17271818 Arabidopsis thaliana
AT4G36630 5.0kb upstream 5.0kb upstream 9798 true Chr4: 17271819-17281616 Arabidopsis thaliana
AT4G36630 5.0kb upstream 5.0kb upstream 5000 false Chr4: 17276617-17281616 Arabidopsis thaliana
AT4G36630 5.0kb downstream 5.0kb downstream 9798 true Chr4: 17266819-17276616 Arabidopsis thaliana
AT4G36630 5.0kb downstream 5.0kb downstream 5000 false Chr4: 17266819-17271818 Arabidopsis thaliana
AT4G36630 10.0kb upstream 10.0kb upstream 14798 true Chr4: 17271819-17286616 Arabidopsis thaliana
AT4G36630 10.0kb upstream 10.0kb upstream 10000 false Chr4: 17276617-17286616 Arabidopsis thaliana
AT4G36630 10.0kb downstream 10.0kb downstream 14798 true Chr4: 17261819-17276616 Arabidopsis thaliana
AT4G36630 10.0kb downstream 10.0kb downstream 10000 false Chr4: 17261819-17271818 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369721 5261 Brassicaceae View MSA
123829448 5264 Brassicales-Malvales View MSA
124345824 5266 SBM View MSA
124238775 5268 Malvidae View MSA
124065437 5270 Rosid View MSA
123737407 5271 Pentapetalae View MSA
122791369 5272 Eudicot View MSA
122042923 5273 Angiosperm View MSA
121345932 5274 Embryophyte View MSA
123428312 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.027       Low
cufflinks 13.092        
cufflinks 10.007        
cufflinks 13.8       High
cufflinks 11.162        
cufflinks 12.388        

0 Strain