Gene : STY2 A. thaliana TAIR10
Primary Identifier:  ? AT4G36260 Defline:  (1 of 5) PTHR31604//PTHR31604:SF3 - FAMILY NOT NAMED // PROTEIN SHI RELATED SEQUENCE 1-RELATED
Genomic Order:  3723 Name:  ? AT4G36260
Secondary Identifier:  ? PAC:19647022
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G36260 0.5kb upstream 0.5kb upstream 2190 true Chr4: 17155556-17157745 Arabidopsis thaliana
AT4G36260 0.5kb upstream 0.5kb upstream 500 false Chr4: 17157246-17157745 Arabidopsis thaliana
AT4G36260 0.5kb downstream 0.5kb downstream 2190 true Chr4: 17155056-17157245 Arabidopsis thaliana
AT4G36260 0.5kb downstream 0.5kb downstream 500 false Chr4: 17155056-17155555 Arabidopsis thaliana
AT4G36260 1.0kb upstream 1.0kb upstream 2690 true Chr4: 17155556-17158245 Arabidopsis thaliana
AT4G36260 1.0kb upstream 1.0kb upstream 1000 false Chr4: 17157246-17158245 Arabidopsis thaliana
AT4G36260 1.0kb downstream 1.0kb downstream 2690 true Chr4: 17154556-17157245 Arabidopsis thaliana
AT4G36260 1.0kb downstream 1.0kb downstream 1000 false Chr4: 17154556-17155555 Arabidopsis thaliana
AT4G36260 2.0kb upstream 2.0kb upstream 3690 true Chr4: 17155556-17159245 Arabidopsis thaliana
AT4G36260 2.0kb upstream 2.0kb upstream 2000 false Chr4: 17157246-17159245 Arabidopsis thaliana
AT4G36260 2.0kb downstream 2.0kb downstream 3690 true Chr4: 17153556-17157245 Arabidopsis thaliana
AT4G36260 2.0kb downstream 2.0kb downstream 2000 false Chr4: 17153556-17155555 Arabidopsis thaliana
AT4G36260 5.0kb upstream 5.0kb upstream 6690 true Chr4: 17155556-17162245 Arabidopsis thaliana
AT4G36260 5.0kb upstream 5.0kb upstream 5000 false Chr4: 17157246-17162245 Arabidopsis thaliana
AT4G36260 5.0kb downstream 5.0kb downstream 6690 true Chr4: 17150556-17157245 Arabidopsis thaliana
AT4G36260 5.0kb downstream 5.0kb downstream 5000 false Chr4: 17150556-17155555 Arabidopsis thaliana
AT4G36260 10.0kb upstream 10.0kb upstream 11690 true Chr4: 17155556-17167245 Arabidopsis thaliana
AT4G36260 10.0kb upstream 10.0kb upstream 10000 false Chr4: 17157246-17167245 Arabidopsis thaliana
AT4G36260 10.0kb downstream 10.0kb downstream 11690 true Chr4: 17145556-17157245 Arabidopsis thaliana
AT4G36260 10.0kb downstream 10.0kb downstream 10000 false Chr4: 17145556-17155555 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375383 5261 Brassicaceae View MSA
123800944 5264 Brassicales-Malvales View MSA
124298299 5266 SBM View MSA
124149972 5268 Malvidae View MSA
124051795 5270 Rosid View MSA
123749314 5271 Pentapetalae View MSA
122796752 5272 Eudicot View MSA
122049669 5273 Angiosperm View MSA
121344202 5274 Embryophyte View MSA
123379999 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.722        
cufflinks 9.976       High
cufflinks 0.902        
cufflinks 8.189        
cufflinks 0.821        
cufflinks 7.665        

0 Strain