Gene : AT4G36180 A. thaliana TAIR10
Defline:  (1 of 12) PF00560//PF07714//PF08263//PF13855 - Leucine Rich Repeat (LRR_1) // Protein tyrosine kinase (Pkinase_Tyr) // Leucine rich repeat N-terminal domain (LRRNT_2) // Leucine rich repeat (LRR_8) Genomic Order:  3715
Name:  ? AT4G36180 Secondary Identifier:  ? PAC:19644320
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G36180 0.5kb upstream 0.5kb upstream 4257 true Chr4: 17120085-17124341 Arabidopsis thaliana
AT4G36180 0.5kb upstream 0.5kb upstream 500 false Chr4: 17123842-17124341 Arabidopsis thaliana
AT4G36180 0.5kb downstream 0.5kb downstream 4257 true Chr4: 17119585-17123841 Arabidopsis thaliana
AT4G36180 0.5kb downstream 0.5kb downstream 500 false Chr4: 17119585-17120084 Arabidopsis thaliana
AT4G36180 1.0kb upstream 1.0kb upstream 4757 true Chr4: 17120085-17124841 Arabidopsis thaliana
AT4G36180 1.0kb upstream 1.0kb upstream 1000 false Chr4: 17123842-17124841 Arabidopsis thaliana
AT4G36180 1.0kb downstream 1.0kb downstream 4757 true Chr4: 17119085-17123841 Arabidopsis thaliana
AT4G36180 1.0kb downstream 1.0kb downstream 1000 false Chr4: 17119085-17120084 Arabidopsis thaliana
AT4G36180 2.0kb upstream 2.0kb upstream 5757 true Chr4: 17120085-17125841 Arabidopsis thaliana
AT4G36180 2.0kb upstream 2.0kb upstream 2000 false Chr4: 17123842-17125841 Arabidopsis thaliana
AT4G36180 2.0kb downstream 2.0kb downstream 5757 true Chr4: 17118085-17123841 Arabidopsis thaliana
AT4G36180 2.0kb downstream 2.0kb downstream 2000 false Chr4: 17118085-17120084 Arabidopsis thaliana
AT4G36180 5.0kb upstream 5.0kb upstream 8757 true Chr4: 17120085-17128841 Arabidopsis thaliana
AT4G36180 5.0kb upstream 5.0kb upstream 5000 false Chr4: 17123842-17128841 Arabidopsis thaliana
AT4G36180 5.0kb downstream 5.0kb downstream 8757 true Chr4: 17115085-17123841 Arabidopsis thaliana
AT4G36180 5.0kb downstream 5.0kb downstream 5000 false Chr4: 17115085-17120084 Arabidopsis thaliana
AT4G36180 10.0kb upstream 10.0kb upstream 13757 true Chr4: 17120085-17133841 Arabidopsis thaliana
AT4G36180 10.0kb upstream 10.0kb upstream 10000 false Chr4: 17123842-17133841 Arabidopsis thaliana
AT4G36180 10.0kb downstream 10.0kb downstream 13757 true Chr4: 17110085-17123841 Arabidopsis thaliana
AT4G36180 10.0kb downstream 10.0kb downstream 10000 false Chr4: 17110085-17120084 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368675 5261 Brassicaceae View MSA
123839196 5264 Brassicales-Malvales View MSA
124350583 5266 SBM View MSA
124244618 5268 Malvidae View MSA
124072854 5270 Rosid View MSA
123749068 5271 Pentapetalae View MSA
122791157 5272 Eudicot View MSA
122043000 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121350177 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.403        
cufflinks 23.545        
cufflinks 3.937        
cufflinks 23.079        
cufflinks 3.112       Low
cufflinks 31.886     High High

0 Strain