Gene : AT4G36080 A. thaliana TAIR10
Defline:  (1 of 2) K08874 - transformation/transcription domain-associated protein (TRRAP) Genomic Order:  3704
Name:  ? AT4G36080 Secondary Identifier:  ? PAC:19645257
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G36080 0.5kb upstream 0.5kb upstream 18684 true Chr4: 17059824-17078507 Arabidopsis thaliana
AT4G36080 0.5kb upstream 0.5kb upstream 500 false Chr4: 17078008-17078507 Arabidopsis thaliana
AT4G36080 0.5kb downstream 0.5kb downstream 18684 true Chr4: 17059324-17078007 Arabidopsis thaliana
AT4G36080 0.5kb downstream 0.5kb downstream 500 false Chr4: 17059324-17059823 Arabidopsis thaliana
AT4G36080 1.0kb upstream 1.0kb upstream 19184 true Chr4: 17059824-17079007 Arabidopsis thaliana
AT4G36080 1.0kb upstream 1.0kb upstream 1000 false Chr4: 17078008-17079007 Arabidopsis thaliana
AT4G36080 1.0kb downstream 1.0kb downstream 19184 true Chr4: 17058824-17078007 Arabidopsis thaliana
AT4G36080 1.0kb downstream 1.0kb downstream 1000 false Chr4: 17058824-17059823 Arabidopsis thaliana
AT4G36080 2.0kb upstream 2.0kb upstream 20184 true Chr4: 17059824-17080007 Arabidopsis thaliana
AT4G36080 2.0kb upstream 2.0kb upstream 2000 false Chr4: 17078008-17080007 Arabidopsis thaliana
AT4G36080 2.0kb downstream 2.0kb downstream 20184 true Chr4: 17057824-17078007 Arabidopsis thaliana
AT4G36080 2.0kb downstream 2.0kb downstream 2000 false Chr4: 17057824-17059823 Arabidopsis thaliana
AT4G36080 5.0kb upstream 5.0kb upstream 23184 true Chr4: 17059824-17083007 Arabidopsis thaliana
AT4G36080 5.0kb upstream 5.0kb upstream 5000 false Chr4: 17078008-17083007 Arabidopsis thaliana
AT4G36080 5.0kb downstream 5.0kb downstream 23184 true Chr4: 17054824-17078007 Arabidopsis thaliana
AT4G36080 5.0kb downstream 5.0kb downstream 5000 false Chr4: 17054824-17059823 Arabidopsis thaliana
AT4G36080 10.0kb upstream 10.0kb upstream 28184 true Chr4: 17059824-17088007 Arabidopsis thaliana
AT4G36080 10.0kb upstream 10.0kb upstream 10000 false Chr4: 17078008-17088007 Arabidopsis thaliana
AT4G36080 10.0kb downstream 10.0kb downstream 28184 true Chr4: 17049824-17078007 Arabidopsis thaliana
AT4G36080 10.0kb downstream 10.0kb downstream 10000 false Chr4: 17049824-17059823 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027431 5273 Angiosperm View MSA
122366984 5261 Brassicaceae View MSA
123838828 5264 Brassicales-Malvales View MSA
124339696 5266 SBM View MSA
124241713 5268 Malvidae View MSA
124067016 5270 Rosid View MSA
123737923 5271 Pentapetalae View MSA
122791578 5272 Eudicot View MSA
121344769 5274 Embryophyte View MSA
123424018 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.294        
cufflinks 1.721        
cufflinks 0.893       Low
cufflinks 1.976       High
cufflinks 1.093        
cufflinks 1.914        

0 Strain