Gene : AT4G39110 A. thaliana TAIR10
Defline:  (1 of 16) PF07714//PF11721 - Protein tyrosine kinase (Pkinase_Tyr) // Di-glucose binding within endoplasmic reticulum (Malectin) Genomic Order:  4019
Name:  ? AT4G39110 Secondary Identifier:  ? PAC:19646958
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G39110 0.5kb upstream 0.5kb upstream 3137 true Chr4: 18222483-18225619 Arabidopsis thaliana
AT4G39110 0.5kb upstream 0.5kb upstream 500 false Chr4: 18225120-18225619 Arabidopsis thaliana
AT4G39110 0.5kb downstream 0.5kb downstream 3137 true Chr4: 18221983-18225119 Arabidopsis thaliana
AT4G39110 0.5kb downstream 0.5kb downstream 500 false Chr4: 18221983-18222482 Arabidopsis thaliana
AT4G39110 1.0kb upstream 1.0kb upstream 3637 true Chr4: 18222483-18226119 Arabidopsis thaliana
AT4G39110 1.0kb upstream 1.0kb upstream 1000 false Chr4: 18225120-18226119 Arabidopsis thaliana
AT4G39110 1.0kb downstream 1.0kb downstream 3637 true Chr4: 18221483-18225119 Arabidopsis thaliana
AT4G39110 1.0kb downstream 1.0kb downstream 1000 false Chr4: 18221483-18222482 Arabidopsis thaliana
AT4G39110 2.0kb upstream 2.0kb upstream 4637 true Chr4: 18222483-18227119 Arabidopsis thaliana
AT4G39110 2.0kb upstream 2.0kb upstream 2000 false Chr4: 18225120-18227119 Arabidopsis thaliana
AT4G39110 2.0kb downstream 2.0kb downstream 4637 true Chr4: 18220483-18225119 Arabidopsis thaliana
AT4G39110 2.0kb downstream 2.0kb downstream 2000 false Chr4: 18220483-18222482 Arabidopsis thaliana
AT4G39110 5.0kb upstream 5.0kb upstream 7637 true Chr4: 18222483-18230119 Arabidopsis thaliana
AT4G39110 5.0kb upstream 5.0kb upstream 5000 false Chr4: 18225120-18230119 Arabidopsis thaliana
AT4G39110 5.0kb downstream 5.0kb downstream 7637 true Chr4: 18217483-18225119 Arabidopsis thaliana
AT4G39110 5.0kb downstream 5.0kb downstream 5000 false Chr4: 18217483-18222482 Arabidopsis thaliana
AT4G39110 10.0kb upstream 10.0kb upstream 12637 true Chr4: 18222483-18235119 Arabidopsis thaliana
AT4G39110 10.0kb upstream 10.0kb upstream 10000 false Chr4: 18225120-18235119 Arabidopsis thaliana
AT4G39110 10.0kb downstream 10.0kb downstream 12637 true Chr4: 18212483-18225119 Arabidopsis thaliana
AT4G39110 10.0kb downstream 10.0kb downstream 10000 false Chr4: 18212483-18222482 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367774 5261 Brassicaceae View MSA
123841369 5264 Brassicales-Malvales View MSA
124322909 5266 SBM View MSA
124253409 5268 Malvidae View MSA
124064554 5270 Rosid View MSA
123740895 5271 Pentapetalae View MSA
122788029 5272 Eudicot View MSA
122047957 5273 Angiosperm View MSA
121310822 5274 Embryophyte View MSA
123348213 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.205     Low  
cufflinks 0.983       High
cufflinks 0.244     Low  
cufflinks 0.748        
cufflinks 0.163     Low Low
cufflinks 0.789        

0 Strain