Gene : AT4G38890 A. thaliana TAIR10
Defline:  (1 of 1) 1.3.1.89 - tRNA-dihydrouridine(47) synthase (NAD(P)(+)) / tRNA-dihydrouridine synthase 3 Genomic Order:  3996
Name:  ? AT4G38890 Secondary Identifier:  ? PAC:19646938
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G38890 0.5kb upstream 0.5kb upstream 3907 true Chr4: 18135800-18139706 Arabidopsis thaliana
AT4G38890 0.5kb upstream 0.5kb upstream 500 false Chr4: 18139207-18139706 Arabidopsis thaliana
AT4G38890 0.5kb downstream 0.5kb downstream 3907 true Chr4: 18135300-18139206 Arabidopsis thaliana
AT4G38890 0.5kb downstream 0.5kb downstream 500 false Chr4: 18135300-18135799 Arabidopsis thaliana
AT4G38890 1.0kb upstream 1.0kb upstream 4407 true Chr4: 18135800-18140206 Arabidopsis thaliana
AT4G38890 1.0kb upstream 1.0kb upstream 1000 false Chr4: 18139207-18140206 Arabidopsis thaliana
AT4G38890 1.0kb downstream 1.0kb downstream 4407 true Chr4: 18134800-18139206 Arabidopsis thaliana
AT4G38890 1.0kb downstream 1.0kb downstream 1000 false Chr4: 18134800-18135799 Arabidopsis thaliana
AT4G38890 2.0kb upstream 2.0kb upstream 5407 true Chr4: 18135800-18141206 Arabidopsis thaliana
AT4G38890 2.0kb upstream 2.0kb upstream 2000 false Chr4: 18139207-18141206 Arabidopsis thaliana
AT4G38890 2.0kb downstream 2.0kb downstream 5407 true Chr4: 18133800-18139206 Arabidopsis thaliana
AT4G38890 2.0kb downstream 2.0kb downstream 2000 false Chr4: 18133800-18135799 Arabidopsis thaliana
AT4G38890 5.0kb upstream 5.0kb upstream 8407 true Chr4: 18135800-18144206 Arabidopsis thaliana
AT4G38890 5.0kb upstream 5.0kb upstream 5000 false Chr4: 18139207-18144206 Arabidopsis thaliana
AT4G38890 5.0kb downstream 5.0kb downstream 8407 true Chr4: 18130800-18139206 Arabidopsis thaliana
AT4G38890 5.0kb downstream 5.0kb downstream 5000 false Chr4: 18130800-18135799 Arabidopsis thaliana
AT4G38890 10.0kb upstream 10.0kb upstream 13407 true Chr4: 18135800-18149206 Arabidopsis thaliana
AT4G38890 10.0kb upstream 10.0kb upstream 10000 false Chr4: 18139207-18149206 Arabidopsis thaliana
AT4G38890 10.0kb downstream 10.0kb downstream 13407 true Chr4: 18125800-18139206 Arabidopsis thaliana
AT4G38890 10.0kb downstream 10.0kb downstream 10000 false Chr4: 18125800-18135799 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364066 5261 Brassicaceae View MSA
123832370 5264 Brassicales-Malvales View MSA
124337121 5266 SBM View MSA
124242197 5268 Malvidae View MSA
124062721 5270 Rosid View MSA
123739972 5271 Pentapetalae View MSA
122787852 5272 Eudicot View MSA
122047874 5273 Angiosperm View MSA
121343819 5274 Embryophyte View MSA
123428585 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.292        
cufflinks 13.319        
cufflinks 11.263        
cufflinks 14.512       High
cufflinks 11.118        
cufflinks 14.719       High

0 Strain