Gene : AT4G38930 A. thaliana TAIR10
Defline:  (1 of 3) K14016 - ubiquitin fusion degradation protein 1 (UFD1) Genomic Order:  4000
Name:  ? AT4G38930 Secondary Identifier:  ? PAC:19643871
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G38930 0.5kb upstream 0.5kb upstream 2760 true Chr4: 18149034-18151793 Arabidopsis thaliana
AT4G38930 0.5kb upstream 0.5kb upstream 500 false Chr4: 18149034-18149533 Arabidopsis thaliana
AT4G38930 0.5kb downstream 0.5kb downstream 2760 true Chr4: 18149534-18152293 Arabidopsis thaliana
AT4G38930 0.5kb downstream 0.5kb downstream 500 false Chr4: 18151794-18152293 Arabidopsis thaliana
AT4G38930 1.0kb upstream 1.0kb upstream 3260 true Chr4: 18148534-18151793 Arabidopsis thaliana
AT4G38930 1.0kb upstream 1.0kb upstream 1000 false Chr4: 18148534-18149533 Arabidopsis thaliana
AT4G38930 1.0kb downstream 1.0kb downstream 3260 true Chr4: 18149534-18152793 Arabidopsis thaliana
AT4G38930 1.0kb downstream 1.0kb downstream 1000 false Chr4: 18151794-18152793 Arabidopsis thaliana
AT4G38930 2.0kb upstream 2.0kb upstream 4260 true Chr4: 18147534-18151793 Arabidopsis thaliana
AT4G38930 2.0kb upstream 2.0kb upstream 2000 false Chr4: 18147534-18149533 Arabidopsis thaliana
AT4G38930 2.0kb downstream 2.0kb downstream 4260 true Chr4: 18149534-18153793 Arabidopsis thaliana
AT4G38930 2.0kb downstream 2.0kb downstream 2000 false Chr4: 18151794-18153793 Arabidopsis thaliana
AT4G38930 5.0kb upstream 5.0kb upstream 7260 true Chr4: 18144534-18151793 Arabidopsis thaliana
AT4G38930 5.0kb upstream 5.0kb upstream 5000 false Chr4: 18144534-18149533 Arabidopsis thaliana
AT4G38930 5.0kb downstream 5.0kb downstream 7260 true Chr4: 18149534-18156793 Arabidopsis thaliana
AT4G38930 5.0kb downstream 5.0kb downstream 5000 false Chr4: 18151794-18156793 Arabidopsis thaliana
AT4G38930 10.0kb upstream 10.0kb upstream 12260 true Chr4: 18139534-18151793 Arabidopsis thaliana
AT4G38930 10.0kb upstream 10.0kb upstream 10000 false Chr4: 18139534-18149533 Arabidopsis thaliana
AT4G38930 10.0kb downstream 10.0kb downstream 12260 true Chr4: 18149534-18161793 Arabidopsis thaliana
AT4G38930 10.0kb downstream 10.0kb downstream 10000 false Chr4: 18151794-18161793 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121502797 5273 Angiosperm View MSA
122343675 5261 Brassicaceae View MSA
123783802 5264 Brassicales-Malvales View MSA
124282015 5266 SBM View MSA
124136678 5268 Malvidae View MSA
123864499 5270 Rosid View MSA
123449803 5271 Pentapetalae View MSA
122485332 5272 Eudicot View MSA
120776099 5274 Embryophyte View MSA
122818383 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.162        
cufflinks 5.809        
cufflinks 3.48       Low
cufflinks 6.283       High
cufflinks 3.857        
cufflinks 5.69        

0 Strain