Gene : AT4G38810 A. thaliana TAIR10
Defline:  (1 of 1) PTHR34574//PTHR34574:SF2 - FAMILY NOT NAMED // EF-HAND CONTAINING PROTEIN-LIKE Genomic Order:  3987
Name:  ? AT4G38810 Secondary Identifier:  ? PAC:19646468
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G38810 0.5kb upstream 0.5kb upstream 4295 true Chr4: 18115283-18119577 Arabidopsis thaliana
AT4G38810 0.5kb upstream 0.5kb upstream 500 false Chr4: 18119078-18119577 Arabidopsis thaliana
AT4G38810 0.5kb downstream 0.5kb downstream 4295 true Chr4: 18114783-18119077 Arabidopsis thaliana
AT4G38810 0.5kb downstream 0.5kb downstream 500 false Chr4: 18114783-18115282 Arabidopsis thaliana
AT4G38810 1.0kb upstream 1.0kb upstream 4795 true Chr4: 18115283-18120077 Arabidopsis thaliana
AT4G38810 1.0kb upstream 1.0kb upstream 1000 false Chr4: 18119078-18120077 Arabidopsis thaliana
AT4G38810 1.0kb downstream 1.0kb downstream 4795 true Chr4: 18114283-18119077 Arabidopsis thaliana
AT4G38810 1.0kb downstream 1.0kb downstream 1000 false Chr4: 18114283-18115282 Arabidopsis thaliana
AT4G38810 2.0kb upstream 2.0kb upstream 5795 true Chr4: 18115283-18121077 Arabidopsis thaliana
AT4G38810 2.0kb upstream 2.0kb upstream 2000 false Chr4: 18119078-18121077 Arabidopsis thaliana
AT4G38810 2.0kb downstream 2.0kb downstream 5795 true Chr4: 18113283-18119077 Arabidopsis thaliana
AT4G38810 2.0kb downstream 2.0kb downstream 2000 false Chr4: 18113283-18115282 Arabidopsis thaliana
AT4G38810 5.0kb upstream 5.0kb upstream 8795 true Chr4: 18115283-18124077 Arabidopsis thaliana
AT4G38810 5.0kb upstream 5.0kb upstream 5000 false Chr4: 18119078-18124077 Arabidopsis thaliana
AT4G38810 5.0kb downstream 5.0kb downstream 8795 true Chr4: 18110283-18119077 Arabidopsis thaliana
AT4G38810 5.0kb downstream 5.0kb downstream 5000 false Chr4: 18110283-18115282 Arabidopsis thaliana
AT4G38810 10.0kb upstream 10.0kb upstream 13795 true Chr4: 18115283-18129077 Arabidopsis thaliana
AT4G38810 10.0kb upstream 10.0kb upstream 10000 false Chr4: 18119078-18129077 Arabidopsis thaliana
AT4G38810 10.0kb downstream 10.0kb downstream 13795 true Chr4: 18105283-18119077 Arabidopsis thaliana
AT4G38810 10.0kb downstream 10.0kb downstream 10000 false Chr4: 18105283-18115282 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367184 5261 Brassicaceae View MSA
123836025 5264 Brassicales-Malvales View MSA
124345347 5266 SBM View MSA
124252687 5268 Malvidae View MSA
124062130 5270 Rosid View MSA
123739646 5271 Pentapetalae View MSA
122789381 5272 Eudicot View MSA
122043203 5273 Angiosperm View MSA
121346779 5274 Embryophyte View MSA
123380443 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.82        
cufflinks 6.481        
cufflinks 9.329        
cufflinks 10.594        
cufflinks 13.278       High
cufflinks 6.32       Low

0 Strain