Gene : AT4G38870 A. thaliana TAIR10
Defline:  (1 of 89) PTHR31790//PTHR31790:SF10 - FAMILY NOT NAMED // F-BOX ASSOCIATED UBIQUITINATION EFFECTOR FAMILY PROTEIN-RELATED Genomic Order:  3994
Name:  ? AT4G38870 Secondary Identifier:  ? PAC:19647508
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G38870 0.5kb upstream 0.5kb upstream 1781 true Chr4: 18132583-18134363 Arabidopsis thaliana
AT4G38870 0.5kb upstream 0.5kb upstream 500 false Chr4: 18133864-18134363 Arabidopsis thaliana
AT4G38870 0.5kb downstream 0.5kb downstream 1781 true Chr4: 18132083-18133863 Arabidopsis thaliana
AT4G38870 0.5kb downstream 0.5kb downstream 500 false Chr4: 18132083-18132582 Arabidopsis thaliana
AT4G38870 1.0kb upstream 1.0kb upstream 2281 true Chr4: 18132583-18134863 Arabidopsis thaliana
AT4G38870 1.0kb upstream 1.0kb upstream 1000 false Chr4: 18133864-18134863 Arabidopsis thaliana
AT4G38870 1.0kb downstream 1.0kb downstream 2281 true Chr4: 18131583-18133863 Arabidopsis thaliana
AT4G38870 1.0kb downstream 1.0kb downstream 1000 false Chr4: 18131583-18132582 Arabidopsis thaliana
AT4G38870 2.0kb upstream 2.0kb upstream 3281 true Chr4: 18132583-18135863 Arabidopsis thaliana
AT4G38870 2.0kb upstream 2.0kb upstream 2000 false Chr4: 18133864-18135863 Arabidopsis thaliana
AT4G38870 2.0kb downstream 2.0kb downstream 3281 true Chr4: 18130583-18133863 Arabidopsis thaliana
AT4G38870 2.0kb downstream 2.0kb downstream 2000 false Chr4: 18130583-18132582 Arabidopsis thaliana
AT4G38870 5.0kb upstream 5.0kb upstream 6281 true Chr4: 18132583-18138863 Arabidopsis thaliana
AT4G38870 5.0kb upstream 5.0kb upstream 5000 false Chr4: 18133864-18138863 Arabidopsis thaliana
AT4G38870 5.0kb downstream 5.0kb downstream 6281 true Chr4: 18127583-18133863 Arabidopsis thaliana
AT4G38870 5.0kb downstream 5.0kb downstream 5000 false Chr4: 18127583-18132582 Arabidopsis thaliana
AT4G38870 10.0kb upstream 10.0kb upstream 11281 true Chr4: 18132583-18143863 Arabidopsis thaliana
AT4G38870 10.0kb upstream 10.0kb upstream 10000 false Chr4: 18133864-18143863 Arabidopsis thaliana
AT4G38870 10.0kb downstream 10.0kb downstream 11281 true Chr4: 18122583-18133863 Arabidopsis thaliana
AT4G38870 10.0kb downstream 10.0kb downstream 10000 false Chr4: 18122583-18132582 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381617 5261 Brassicaceae View MSA
123841457 5264 Brassicales-Malvales View MSA
124350593 5266 SBM View MSA
124252683 5268 Malvidae View MSA
124074667 5270 Rosid View MSA
123753263 5271 Pentapetalae View MSA
122797953 5272 Eudicot View MSA
122051694 5273 Angiosperm View MSA
121351156 5274 Embryophyte View MSA
123382030 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.289        
cufflinks 0.035     Low  
cufflinks 0.304        
cufflinks 0.024     Low Low
cufflinks 0.569       High
cufflinks 0.036     Low  

0 Strain