Gene : AT4G38540 A. thaliana TAIR10
Defline:  (1 of 2) PTHR13789//PTHR13789:SF185 - MONOOXYGENASE // FAD/NAD(P)-BINDING OXIDOREDUCTASE FAMILY PROTEIN Genomic Order:  3962
Name:  ? AT4G38540 Secondary Identifier:  ? PAC:19645694
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G38540 0.5kb upstream 0.5kb upstream 2407 true Chr4: 18022621-18025027 Arabidopsis thaliana
AT4G38540 0.5kb upstream 0.5kb upstream 500 false Chr4: 18022621-18023120 Arabidopsis thaliana
AT4G38540 0.5kb downstream 0.5kb downstream 2407 true Chr4: 18023121-18025527 Arabidopsis thaliana
AT4G38540 0.5kb downstream 0.5kb downstream 500 false Chr4: 18025028-18025527 Arabidopsis thaliana
AT4G38540 1.0kb upstream 1.0kb upstream 2907 true Chr4: 18022121-18025027 Arabidopsis thaliana
AT4G38540 1.0kb upstream 1.0kb upstream 1000 false Chr4: 18022121-18023120 Arabidopsis thaliana
AT4G38540 1.0kb downstream 1.0kb downstream 2907 true Chr4: 18023121-18026027 Arabidopsis thaliana
AT4G38540 1.0kb downstream 1.0kb downstream 1000 false Chr4: 18025028-18026027 Arabidopsis thaliana
AT4G38540 2.0kb upstream 2.0kb upstream 3907 true Chr4: 18021121-18025027 Arabidopsis thaliana
AT4G38540 2.0kb upstream 2.0kb upstream 2000 false Chr4: 18021121-18023120 Arabidopsis thaliana
AT4G38540 2.0kb downstream 2.0kb downstream 3907 true Chr4: 18023121-18027027 Arabidopsis thaliana
AT4G38540 2.0kb downstream 2.0kb downstream 2000 false Chr4: 18025028-18027027 Arabidopsis thaliana
AT4G38540 5.0kb upstream 5.0kb upstream 6907 true Chr4: 18018121-18025027 Arabidopsis thaliana
AT4G38540 5.0kb upstream 5.0kb upstream 5000 false Chr4: 18018121-18023120 Arabidopsis thaliana
AT4G38540 5.0kb downstream 5.0kb downstream 6907 true Chr4: 18023121-18030027 Arabidopsis thaliana
AT4G38540 5.0kb downstream 5.0kb downstream 5000 false Chr4: 18025028-18030027 Arabidopsis thaliana
AT4G38540 10.0kb upstream 10.0kb upstream 11907 true Chr4: 18013121-18025027 Arabidopsis thaliana
AT4G38540 10.0kb upstream 10.0kb upstream 10000 false Chr4: 18013121-18023120 Arabidopsis thaliana
AT4G38540 10.0kb downstream 10.0kb downstream 11907 true Chr4: 18023121-18035027 Arabidopsis thaliana
AT4G38540 10.0kb downstream 10.0kb downstream 10000 false Chr4: 18025028-18035027 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372468 5261 Brassicaceae View MSA
123833062 5264 Brassicales-Malvales View MSA
124339026 5266 SBM View MSA
124249746 5268 Malvidae View MSA
124074153 5270 Rosid View MSA
123750629 5271 Pentapetalae View MSA
122796430 5272 Eudicot View MSA
122051519 5273 Angiosperm View MSA
123429089 5275 Viridiplantae View MSA
121349985 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.377        
cufflinks 20.388        
cufflinks 13.353        
cufflinks 33.876     High High
cufflinks 26.548     High  
cufflinks 13.046        

0 Strain