Gene : AT4G38510 A. thaliana TAIR10
Defline:  (1 of 3) K02147 - V-type H+-transporting ATPase subunit B (ATPeV1B, ATP6B) Genomic Order:  3959
Name:  ? AT4G38510 Secondary Identifier:  ? PAC:19647847
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G38510 0.5kb upstream 0.5kb upstream 4862 true Chr4: 18010812-18015673 Arabidopsis thaliana
AT4G38510 0.5kb upstream 0.5kb upstream 500 false Chr4: 18015174-18015673 Arabidopsis thaliana
AT4G38510 0.5kb downstream 0.5kb downstream 4862 true Chr4: 18010312-18015173 Arabidopsis thaliana
AT4G38510 0.5kb downstream 0.5kb downstream 500 false Chr4: 18010312-18010811 Arabidopsis thaliana
AT4G38510 1.0kb upstream 1.0kb upstream 5362 true Chr4: 18010812-18016173 Arabidopsis thaliana
AT4G38510 1.0kb upstream 1.0kb upstream 1000 false Chr4: 18015174-18016173 Arabidopsis thaliana
AT4G38510 1.0kb downstream 1.0kb downstream 5362 true Chr4: 18009812-18015173 Arabidopsis thaliana
AT4G38510 1.0kb downstream 1.0kb downstream 1000 false Chr4: 18009812-18010811 Arabidopsis thaliana
AT4G38510 2.0kb upstream 2.0kb upstream 6362 true Chr4: 18010812-18017173 Arabidopsis thaliana
AT4G38510 2.0kb upstream 2.0kb upstream 2000 false Chr4: 18015174-18017173 Arabidopsis thaliana
AT4G38510 2.0kb downstream 2.0kb downstream 6362 true Chr4: 18008812-18015173 Arabidopsis thaliana
AT4G38510 2.0kb downstream 2.0kb downstream 2000 false Chr4: 18008812-18010811 Arabidopsis thaliana
AT4G38510 5.0kb upstream 5.0kb upstream 9362 true Chr4: 18010812-18020173 Arabidopsis thaliana
AT4G38510 5.0kb upstream 5.0kb upstream 5000 false Chr4: 18015174-18020173 Arabidopsis thaliana
AT4G38510 5.0kb downstream 5.0kb downstream 9362 true Chr4: 18005812-18015173 Arabidopsis thaliana
AT4G38510 5.0kb downstream 5.0kb downstream 5000 false Chr4: 18005812-18010811 Arabidopsis thaliana
AT4G38510 10.0kb upstream 10.0kb upstream 14362 true Chr4: 18010812-18025173 Arabidopsis thaliana
AT4G38510 10.0kb upstream 10.0kb upstream 10000 false Chr4: 18015174-18025173 Arabidopsis thaliana
AT4G38510 10.0kb downstream 10.0kb downstream 14362 true Chr4: 18000812-18015173 Arabidopsis thaliana
AT4G38510 10.0kb downstream 10.0kb downstream 10000 false Chr4: 18000812-18010811 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375513 5261 Brassicaceae View MSA
123835921 5264 Brassicales-Malvales View MSA
124342304 5266 SBM View MSA
124248961 5268 Malvidae View MSA
124071392 5270 Rosid View MSA
123743480 5271 Pentapetalae View MSA
122794276 5272 Eudicot View MSA
122046157 5273 Angiosperm View MSA
121350179 5274 Embryophyte View MSA
123423759 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.375        
cufflinks 6.795        
cufflinks 5.749        
cufflinks 7.293        
cufflinks 5.478       Low
cufflinks 8.712       High

0 Strain