Gene : AT4G38495 A. thaliana TAIR10
Defline:  (1 of 1) PTHR31200:SF1 - INO80 COMPLEX SUBUNIT C Genomic Order:  3957
Name:  ? AT4G38495 Secondary Identifier:  ? PAC:19645921
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G38495 0.5kb upstream 0.5kb upstream 1215 true Chr4: 18007357-18008571 Arabidopsis thaliana
AT4G38495 0.5kb upstream 0.5kb upstream 500 false Chr4: 18008072-18008571 Arabidopsis thaliana
AT4G38495 0.5kb downstream 0.5kb downstream 1215 true Chr4: 18006857-18008071 Arabidopsis thaliana
AT4G38495 0.5kb downstream 0.5kb downstream 500 false Chr4: 18006857-18007356 Arabidopsis thaliana
AT4G38495 1.0kb upstream 1.0kb upstream 1715 true Chr4: 18007357-18009071 Arabidopsis thaliana
AT4G38495 1.0kb upstream 1.0kb upstream 1000 false Chr4: 18008072-18009071 Arabidopsis thaliana
AT4G38495 1.0kb downstream 1.0kb downstream 1715 true Chr4: 18006357-18008071 Arabidopsis thaliana
AT4G38495 1.0kb downstream 1.0kb downstream 1000 false Chr4: 18006357-18007356 Arabidopsis thaliana
AT4G38495 2.0kb upstream 2.0kb upstream 2715 true Chr4: 18007357-18010071 Arabidopsis thaliana
AT4G38495 2.0kb upstream 2.0kb upstream 2000 false Chr4: 18008072-18010071 Arabidopsis thaliana
AT4G38495 2.0kb downstream 2.0kb downstream 2715 true Chr4: 18005357-18008071 Arabidopsis thaliana
AT4G38495 2.0kb downstream 2.0kb downstream 2000 false Chr4: 18005357-18007356 Arabidopsis thaliana
AT4G38495 5.0kb upstream 5.0kb upstream 5715 true Chr4: 18007357-18013071 Arabidopsis thaliana
AT4G38495 5.0kb upstream 5.0kb upstream 5000 false Chr4: 18008072-18013071 Arabidopsis thaliana
AT4G38495 5.0kb downstream 5.0kb downstream 5715 true Chr4: 18002357-18008071 Arabidopsis thaliana
AT4G38495 5.0kb downstream 5.0kb downstream 5000 false Chr4: 18002357-18007356 Arabidopsis thaliana
AT4G38495 10.0kb upstream 10.0kb upstream 10715 true Chr4: 18007357-18018071 Arabidopsis thaliana
AT4G38495 10.0kb upstream 10.0kb upstream 10000 false Chr4: 18008072-18018071 Arabidopsis thaliana
AT4G38495 10.0kb downstream 10.0kb downstream 10715 true Chr4: 17997357-18008071 Arabidopsis thaliana
AT4G38495 10.0kb downstream 10.0kb downstream 10000 false Chr4: 17997357-18007356 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365754 5261 Brassicaceae View MSA
123829228 5264 Brassicales-Malvales View MSA
124338776 5266 SBM View MSA
124243365 5268 Malvidae View MSA
124068335 5270 Rosid View MSA
123741802 5271 Pentapetalae View MSA
122791161 5272 Eudicot View MSA
122047664 5273 Angiosperm View MSA
121347947 5274 Embryophyte View MSA
123380685 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.648       Low
cufflinks 31.12     High High
cufflinks 14.139        
cufflinks 27.229        
cufflinks 16.47        
cufflinks 24.233        

0 Strain